RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 ANKRD20A1Q5TYW2 823 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 ANKRD20A3Q5VUR7 823 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 ALG1LQ6GMV1 187 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 FBXL19Q6PCT2 694 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.89□□□□□ -0.35
PRDM2-208ENST00000487453 ARHGEF18Q6ZSZ5 1173 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 USP30Q70CQ3 517 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 ERN2Q76MJ5 926 aaKnown RBP12.89□□□□□ -0.35
PRDM2-208ENST00000487453 CEP68Q76N32 757 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 FRMD1Q8N878 549 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 PRELID2Q8N945 189 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 CCDC89Q8N998 374 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 CCDC110Q8TBZ0 833 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 GAB3Q8WWW8 586 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 ZNF641Q96N77 438 aaPredicted RBP12.89□□□□□ -0.35
PRDM2-208ENST00000487453 SPATA13Q96N96 652 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 RBM15Q96T37 977 aaKnown RBP eCLIP12.89□□□□□ -0.35
PRDM2-208ENST00000487453 BTBD1Q9H0C5 482 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 GBA3Q9H227 469 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 NEUROG2Q9H2A3 272 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 SUV39H2Q9H5I1 410 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 GLOD4Q9HC38 313 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 PCDHGC4Q9Y5F7 938 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 R4GN57 208 aa12.89□□□□□ -0.35
PRDM2-208ENST00000487453 C16orf96A6NNT2 1141 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 PHF2O75151 1096 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 ITGAVP06756 1048 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 ADRB3P13945 408 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 BCKDHBP21953 392 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 CES1P23141 567 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 OXTRP30559 389 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 ACSL1P33121 698 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 RPL6Q02878 288 aaKnown RBP12.88□□□□□ -0.35
PRDM2-208ENST00000487453 NIPAL4Q0D2K0 466 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 CCDC15Q0P6D6 951 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 TCF15Q12870 199 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 TRAF2Q12933 501 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 MAP7D1Q3KQU3 841 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 AGBL4Q5VU57 503 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 PRR23BQ6ZRT6 265 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 CREG2Q8IUH2 290 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 TAB3Q8N5C8 712 aaPredicted RBP12.88□□□□□ -0.35
PRDM2-208ENST00000487453 ZBTB44Q8NCP5 570 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 OR14C36Q8NHC7 312 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 SPATA22Q8NHS9 363 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 ARRDC2Q8TBH0 407 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 NELL1Q92832 810 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 MAGOHBQ96A72 148 aaKnown RBP12.88□□□□□ -0.35
PRDM2-208ENST00000487453 VOPP1Q96AW1 172 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 IMP4Q96G21 291 aaKnown RBP12.88□□□□□ -0.35
PRDM2-208ENST00000487453 TOE1Q96GM8 510 aaKnown RBP12.88□□□□□ -0.35
PRDM2-208ENST00000487453 SLC25A51Q9H1U9 297 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 USP29Q9HBJ7 922 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 UBP1Q9NZI7 540 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 PCDHB9Q9Y5E1 797 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 RAI2Q9Y5P3 530 aa12.88□□□□□ -0.35
PRDM2-208ENST00000487453 ZNF318Q5VUA4 2279 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 SLC7A4O43246 635 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 OPHN1O60890 802 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 PMPCBO75439 489 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 URI1O94763 535 aaPredicted RBP12.87□□□□□ -0.35
PRDM2-208ENST00000487453 SEMA4FO95754 770 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 MT-CYBP00156 380 aaPredicted RBP12.87□□□□□ -0.35
PRDM2-208ENST00000487453 IGLV3-19P01714 112 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 MMP2P08253 660 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 C7P10643 843 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 PSMB4P28070 264 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 CD68P34810 354 aaPredicted RBP12.87□□□□□ -0.35
PRDM2-208ENST00000487453 CNR2P34972 360 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 ACTN2P35609 894 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 ABL2P42684 1182 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 TNNT3P45378 269 aaPredicted RBP12.87□□□□□ -0.35
PRDM2-208ENST00000487453 KCNJ1P48048 391 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 EPHB1P54762 984 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 ADPRHP54922 357 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 SKOR1P84550 965 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 PRPSAP1Q14558 356 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 PIP5KL1Q5T9C9 394 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 ARMC12Q5T9G4 340 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 DRICH1Q6PGQ1 229 aaPredicted RBP12.87□□□□□ -0.35
PRDM2-208ENST00000487453 BRAT1Q6PJG6 821 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 SLC36A4Q6YBV0 504 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 KDELC2Q7Z4H8 507 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 TTC7BQ86TV6 843 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 ZSWIM9Q86XI8 627 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 ATOH1Q92858 354 aaPredicted RBP12.87□□□□□ -0.35
PRDM2-208ENST00000487453 IFT43Q96FT9 208 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 NSMCE3Q96MG7 304 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 GPR174Q9BXC1 333 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 TDRD1Q9BXT4 1180 aaKnown RBP12.87□□□□□ -0.35
PRDM2-208ENST00000487453 HDAC8Q9BY41 377 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 KCNH6Q9H252 994 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 SGK2Q9HBY8 427 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 FAM86C1Q9NVL1 165 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 ITM2BQ9Y287 266 aa12.87□□□□□ -0.35
PRDM2-208ENST00000487453 A0A1W2PQ67 120 aa12.86□□□□□ -0.35
PRDM2-208ENST00000487453 TSPAN11A1L157 253 aa12.86□□□□□ -0.35
PRDM2-208ENST00000487453 C5orf60A6NFR6 353 aa12.86□□□□□ -0.35
PRDM2-208ENST00000487453 LRRC72A6NJI9 287 aa12.86□□□□□ -0.35
PRDM2-208ENST00000487453 UPK3BL1B0FP48 263 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms