RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 OLIG2Q13516 323 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 PRPSAP1Q14558 356 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 MORF4L2Q15014 288 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 TRADDQ15628 312 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 EOGTQ5NDL2 527 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 SYCP2LQ5T4T6 812 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 IZUMO3Q5VZ72 239 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 CCDC70Q6NSX1 233 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 ZDHHC24Q6UX98 284 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 TMEM92Q6UXU6 159 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 TRIM67Q6ZTA4 783 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 SYT13Q7L8C5 426 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 CAMK1DQ8IU85 385 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 PPIL6Q8IXY8 311 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 STK40Q8N2I9 435 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 PDCD7Q8N8D1 485 aaKnown RBP9.67□□□□□ -0.86
MCF2L-227ENST00000486806 TMIEQ8NEW7 156 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 IPMKQ8NFU5 416 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 GRIN3AQ8TCU5 1115 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 OR8D1Q8WZ84 308 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 RUBCNQ92622 972 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 PRCCQ92733 491 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-227ENST00000486806 FEM1CQ96JP0 617 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 ZNF641Q96N77 438 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-227ENST00000486806 RHOXF2Q9BQY4 288 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 OSBPL1AQ9BXW6 950 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 RSPH9Q9H1X1 276 aaPredicted RBP9.67□□□□□ -0.86
MCF2L-227ENST00000486806 DPH5Q9H2P9 285 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 ZDHHC6Q9H6R6 413 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 LRRC40Q9H9A6 602 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 GOLGA6AQ9NYA3 693 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 DLGAP2Q9P1A6 1054 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 SARDHQ9UL12 918 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 PPM1HQ9ULR3 514 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 SNX24Q9Y343 169 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 RAI2Q9Y5P3 530 aa9.67□□□□□ -0.86
MCF2L-227ENST00000486806 SMAPO00193 183 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 NDC80O14777 642 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 SYNCRIPO60506 623 aaKnown RBP9.66□□□□□ -0.86
MCF2L-227ENST00000486806 PMPCBO75439 489 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 PGLSO95336 258 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 PDGFBP01127 241 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-227ENST00000486806 EPOP01588 193 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 PRNPP04156 253 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 UGT2B4P06133 528 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 ITIH2P19823 946 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 CA4P22748 312 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 TNFRSF8P28908 595 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 MAGEA3P43357 314 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 METAP1P53582 386 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 ITGA8P53708 1063 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 RAD51Q06609 339 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 CDK18Q07002 472 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 BCL2L1Q07817 233 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 STARD3Q14849 445 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 CRY1Q16526 586 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 PCSK7Q16549 785 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 DENND5AQ6IQ26 1287 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 SDE2Q6IQ49 451 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 RANBP10Q6VN20 620 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 GDPD4Q6W3E5 623 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 PCGF5Q86SE9 256 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 ZSWIM9Q86XI8 627 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 RYBPQ8N488 228 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-227ENST00000486806 BBOF1Q8ND07 529 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 MCUQ8NE86 351 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 OR2T3Q8NH03 318 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 PIP4K2CQ8TBX8 421 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 ART4Q93070 314 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 FAM131CQ96AQ9 280 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 SERPINB12Q96P63 405 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 TBL1YQ9BQ87 522 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 IER2Q9BTL4 223 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 FICDQ9BVA6 458 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 FSD1LQ9BXM9 530 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 FAM129AQ9BZQ8 928 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 MKRN2Q9H000 416 aaKnown RBP9.66□□□□□ -0.86
MCF2L-227ENST00000486806 EPC1Q9H2F5 836 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 SUV39H2Q9H5I1 410 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 ARNT2Q9HBZ2 717 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 EPB41L5Q9HCM4 733 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 FAM114A2Q9NRY5 505 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 ZDHHC18Q9NUE0 388 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 POLR3BQ9NW08 1133 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-227ENST00000486806 C2orf42Q9NWW7 574 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 DKK3Q9UBP4 350 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.66□□□□□ -0.86
MCF2L-227ENST00000486806 ARIH1Q9Y4X5 557 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-227ENST00000486806 PCDHGC4Q9Y5F7 938 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 V9GYY5 206 aaPredicted RBP9.66□□□□□ -0.86
MCF2L-227ENST00000486806 MYO10Q9HD67 2058 aa9.66□□□□□ -0.86
MCF2L-227ENST00000486806 TRIOO75962 3097 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 CKAP5Q14008 2032 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 SHROOM3Q8TF72 1996 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 E7EVH7 732 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 C1QTNF3-AMACRE9PGA6 284 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 PSMD3O43242 534 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 CTIFO43310 598 aaKnown RBP9.65□□□□□ -0.86
MCF2L-227ENST00000486806 ATG13O75143 517 aa9.65□□□□□ -0.86
MCF2L-227ENST00000486806 USP12O75317 370 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms