RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 ALOX15BO15296 676 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 GJB3O75712 270 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 PRNPP04156 253 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 CR2P20023 1033 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 HOXD11P31277 338 aaPredicted RBP14.03□□□□□ -0.16
NELFCD-209ENST00000486263 RPL21P46778 160 aaKnown RBP14.03□□□□□ -0.16
NELFCD-209ENST00000486263 CDK16Q00536 496 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 CAV1Q03135 178 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 ENPP2Q13822 863 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 HLTFQ14527 1009 aaKnown RBP eCLIP14.03□□□□□ -0.16
NELFCD-209ENST00000486263 ELAVL3Q14576 367 aaKnown RBP14.03□□□□□ -0.16
NELFCD-209ENST00000486263 SLC14A2Q15849 920 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 ARSIQ5FYB1 569 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 SYCP2LQ5T4T6 812 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 C9orf64Q5T6V5 341 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 GDPD4Q6W3E5 623 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 KDELC2Q7Z4H8 507 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 LINC00523Q86TU6 105 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 PRPF39Q86UA1 669 aaKnown RBP14.03□□□□□ -0.16
NELFCD-209ENST00000486263 PDCD7Q8N8D1 485 aaKnown RBP14.03□□□□□ -0.16
NELFCD-209ENST00000486263 TMEM105Q8N8V8 129 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 CHST14Q8NCH0 376 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 GRIN3AQ8TCU5 1115 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 IFT81Q8WYA0 676 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 ERLEC1Q96DZ1 483 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 OXNAD1Q96HP4 312 aaPredicted RBP14.03□□□□□ -0.16
NELFCD-209ENST00000486263 LRIG1Q96JA1 1093 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 GABRG3Q99928 467 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 OSBPL1AQ9BXW6 950 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 CPEB1Q9BZB8 566 aaKnown RBP14.03□□□□□ -0.16
NELFCD-209ENST00000486263 PRSS16Q9NQE7 514 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 DYRK4Q9NR20 520 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 WHRNQ9P202 907 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.03□□□□□ -0.16
NELFCD-209ENST00000486263 RAPGEFL1Q9UHV5 662 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 DMGDHQ9UI17 866 aaKnown RBP14.03□□□□□ -0.16
NELFCD-209ENST00000486263 SIT1Q9Y3P8 196 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 MTF2Q9Y483 593 aaPredicted RBP14.03□□□□□ -0.16
NELFCD-209ENST00000486263 PCDHGC4Q9Y5F7 938 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 RAI2Q9Y5P3 530 aa14.03□□□□□ -0.16
NELFCD-209ENST00000486263 V9GYY5 206 aaPredicted RBP14.03□□□□□ -0.16
NELFCD-209ENST00000486263 C1QTNF3-AMACRE9PGA6 284 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 SOCS5O75159 536 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 SEC31AO94979 1220 aaKnown RBP14.02□□□□□ -0.17
NELFCD-209ENST00000486263 AP2A1O95782 977 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 IL1BP01584 269 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 MMP2P08253 660 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 TPSB2P20231 275 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 MCM3P25205 808 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 GKP32189 559 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 ITGA8P53708 1063 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 EPHB1P54762 984 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 PTPN5P54829 565 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 DRG2P55039 364 aaKnown RBP14.02□□□□□ -0.17
NELFCD-209ENST00000486263 WNT3AP56704 352 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 CDK18Q07002 472 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 MORF4L2Q15014 288 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 TPSAB1Q15661 275 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 ARMC12Q5T9G4 340 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 FAM46CQ5VWP2 391 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 NAPEPLDQ6IQ20 393 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 HOOK3Q86VS8 718 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 CAMK1DQ8IU85 385 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 NDUFAF2Q8N183 169 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 DNAAF3Q8N9W5 541 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 PJA1Q8NG27 643 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 CPT1BQ92523 772 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 PPP1R16AQ96I34 528 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 ZNF641Q96N77 438 aaPredicted RBP14.02□□□□□ -0.17
NELFCD-209ENST00000486263 TBL1YQ9BQ87 522 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 FICDQ9BVA6 458 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 ADGRE3Q9BY15 652 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 SUV39H2Q9H5I1 410 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 FBRSQ9HAH7 460 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 POLMQ9NP87 494 aaPredicted RBP14.02□□□□□ -0.17
NELFCD-209ENST00000486263 EIF2B3Q9NR50 452 aaKnown RBP14.02□□□□□ -0.17
NELFCD-209ENST00000486263 MMP17Q9ULZ9 603 aa14.02□□□□□ -0.17
NELFCD-209ENST00000486263 A0A1W2PQ67 120 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 ESYT3A0FGR9 886 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 GOLGA8MH3BSY2 632 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 AP3B1O00203 1094 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 KPNA3O00505 521 aaPredicted RBP14.01□□□□□ -0.17
NELFCD-209ENST00000486263 GALR2O43603 387 aaPredicted RBP14.01□□□□□ -0.17
NELFCD-209ENST00000486263 LEFTY1O75610 366 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 PIGNO95427 931 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 UGT2B4P06133 528 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 XPAP23025 273 aaPredicted RBP14.01□□□□□ -0.17
NELFCD-209ENST00000486263 MAGEA9P43362 315 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 PLTPP55058 493 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 POLR2LP62875 67 aaKnown RBP14.01□□□□□ -0.17
NELFCD-209ENST00000486263 CAMK2GQ13555 558 aaPredicted RBP14.01□□□□□ -0.17
NELFCD-209ENST00000486263 CUL1Q13616 776 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 SPARCL1Q14515 664 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 KCNJ11Q14654 390 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 ERCC6LQ2NKX8 1250 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 RNASEH2BQ5TBB1 312 aaKnown RBP14.01□□□□□ -0.17
NELFCD-209ENST00000486263 ZNF776Q68DI1 518 aaPredicted RBP14.01□□□□□ -0.17
NELFCD-209ENST00000486263 Q6ZS52 159 aa14.01□□□□□ -0.17
NELFCD-209ENST00000486263 MMAAQ8IVH4 418 aaKnown RBP14.01□□□□□ -0.17
NELFCD-209ENST00000486263 TMIEQ8NEW7 156 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms