RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 TMEM170AQ8WVE7 144 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 CD101Q93033 1021 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 WBP2Q969T9 261 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 MASTLQ96GX5 879 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 YME1L1Q96TA2 773 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 CTDSP1Q9GZU7 261 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 SRP68Q9UHB9 627 aaKnown RBP4.01□□□□□ -1.77
GCFC2-209ENST00000486016 LRCH1Q9Y2L9 728 aa4.01□□□□□ -1.77
GCFC2-209ENST00000486016 SEPT4O43236 478 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 HSPA12AO43301 675 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 PRC1O43663 620 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 KDM4BO94953 1096 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 CLDN14O95500 239 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 IL1AP01583 271 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 LINC00271P0C7V0 271 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 SETSIPP0DME0 302 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 MCM2P49736 904 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 ZNF132P52740 706 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 PRKAA2P54646 552 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 ARSFP54793 590 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 TBX4P57082 545 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 ZBTB17Q13105 803 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 CHAF1AQ13111 956 aaPredicted RBP4□□□□□ -1.77
GCFC2-209ENST00000486016 CCDC6Q16204 474 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 CALCRLQ16602 461 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 CIARTQ8N365 385 aaPredicted RBP4□□□□□ -1.77
GCFC2-209ENST00000486016 OR6Y1Q8NGX8 325 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 SPATA22Q8NHS9 363 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 ARRDC2Q8TBH0 407 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 RNF183Q96D59 192 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 UHRF2Q96PU4 802 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 SMARCAL1Q9NZC9 954 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 GAB2Q9UQC2 676 aa4□□□□□ -1.77
GCFC2-209ENST00000486016 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.99□□□□□ -1.77
GCFC2-209ENST00000486016 ABHD14A-ACY1A0A1B0GW23 586 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 ZNF587BE7ETH6 402 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 ADAP00813 363 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 CSTBP04080 98 aaKnown RBP3.99□□□□□ -1.77
GCFC2-209ENST00000486016 HTR3AP46098 478 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 ECT2LQ008S8 904 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 ICA1Q05084 483 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 ZNF155Q12901 538 aaPredicted RBP3.99□□□□□ -1.77
GCFC2-209ENST00000486016 MAP9Q49MG5 647 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 CCSAPQ6IQ19 270 aaPredicted RBP3.99□□□□□ -1.77
GCFC2-209ENST00000486016 SATL1Q86VE3 508 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 SFTPA2Q8IWL1 248 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 CCDC105Q8IYK2 499 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 IL17RCQ8NAC3 791 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 LINS1Q8NG48 757 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 LNX1Q8TBB1 728 aaPredicted RBP3.99□□□□□ -1.77
GCFC2-209ENST00000486016 CSGALNACT1Q8TDX6 532 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 SECTM1Q8WVN6 248 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 CRB3Q9BUF7 120 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 C1QTNF5Q9BXJ0 243 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 TAF1DQ9H5J8 278 aaPredicted RBP3.99□□□□□ -1.77
GCFC2-209ENST00000486016 SLCO3A1Q9UIG8 710 aa3.99□□□□□ -1.77
GCFC2-209ENST00000486016 ADGRF5Q8IZF2 1346 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 HNRNPCL2B2RXH8 293 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 IPO5O00410 1097 aaKnown RBP3.98□□□□□ -1.77
GCFC2-209ENST00000486016 SLC25A17O43808 307 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 FAM155BO75949 473 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 KRT38O76015 456 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 DHRS4L1P0CG22 281 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 CD72P21854 359 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 HNF1BP35680 557 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 DMP1Q13316 513 aaPredicted RBP3.98□□□□□ -1.77
GCFC2-209ENST00000486016 KLHDC8BQ8IXV7 354 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 KBTBD3Q8NAB2 608 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 SDCCAG3Q96C92 435 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 RNFT2Q96EX2 444 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 NPLQ9BXD5 320 aaPredicted RBP3.98□□□□□ -1.77
GCFC2-209ENST00000486016 SPATS2LQ9NUQ6 558 aaKnown RBP3.98□□□□□ -1.77
GCFC2-209ENST00000486016 SLC9A2Q9UBY0 812 aa3.98□□□□□ -1.77
GCFC2-209ENST00000486016 CGNL1Q0VF96 1302 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 P2RY10O00398 339 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 EBAG9O00559 213 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 HBP1O60381 514 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 VEGFAP15692 232 aaPredicted RBP3.97□□□□□ -1.77
GCFC2-209ENST00000486016 ITGAXP20702 1163 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 RYKP34925 604 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 RBM5P52756 815 aaKnown RBP eCLIP3.97□□□□□ -1.77
GCFC2-209ENST00000486016 OASLQ15646 514 aaKnown RBP3.97□□□□□ -1.77
GCFC2-209ENST00000486016 EFNB3Q15768 340 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 CBWD5Q5RIA9 395 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 JMJD6Q6NYC1 403 aaPredicted RBP3.97□□□□□ -1.77
GCFC2-209ENST00000486016 MAB21L3Q8N8X9 362 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 OR1F2PQ96R84 312 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 EPYCQ99645 322 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 CLSTN3Q9BQT9 956 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 MMTAG2Q9BU76 263 aaKnown RBP3.97□□□□□ -1.77
GCFC2-209ENST00000486016 ZNF700Q9H0M5 742 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 ZNF224Q9NZL3 707 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 GRHPRQ9UBQ7 328 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 NDRG3Q9UGV2 375 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 ZNF711Q9Y462 761 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 PCDHAC2Q9Y5I4 1007 aa3.97□□□□□ -1.77
GCFC2-209ENST00000486016 hDV102S1A0JD36 115 aa3.96□□□□□ -1.78
GCFC2-209ENST00000486016 FAM172BPA6NC97 362 aa3.96□□□□□ -1.78
GCFC2-209ENST00000486016 HMX3A6NHT5 357 aa3.96□□□□□ -1.78
GCFC2-209ENST00000486016 CBY3A6NI87 242 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms