RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 LIMK2P53671 638 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 ACVR1Q04771 509 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 SLC12A1Q13621 1099 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 LAMB3Q13751 1172 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 KCNC3Q14003 757 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 ZNF77Q15935 545 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 CNGA3Q16281 694 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 DUSP6Q16828 381 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 NCEH1Q6PIU2 408 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 ELMSAN1Q6PJG2 1045 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 LVRNQ6Q4G3 990 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 GRASPQ7Z6J2 395 aaPredicted RBP14.18□□□□□ -0.14
CLK3-204ENST00000483723 STRA8Q7Z7C7 330 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 APCDD1Q8J025 514 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 KIAA1958Q8N8K9 716 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 GDAP1Q8TB36 358 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 IFT43Q96FT9 208 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 VPS11Q9H270 941 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 IARS2Q9NSE4 1012 aaKnown RBP14.18□□□□□ -0.14
CLK3-204ENST00000483723 SLC17A7Q9P2U7 560 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 SLC2A6Q9UGQ3 507 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 VPS28Q9UK41 221 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 PLLPQ9Y342 182 aa14.18□□□□□ -0.14
CLK3-204ENST00000483723 COPEO14579 308 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 LDB2O43679 373 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 PENKP01210 267 aaPredicted RBP14.17□□□□□ -0.14
CLK3-204ENST00000483723 ALDOAP04075 364 aaKnown RBP14.17□□□□□ -0.14
CLK3-204ENST00000483723 PAMP19021 973 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 PSMA3P25788 255 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 NUMBP49757 651 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 CSRP3P50461 194 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 SCNN1BP51168 640 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 SLC20A2Q08357 652 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 LMAN2Q12907 356 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 USP4Q13107 963 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 PDK4Q16654 411 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 QPCTQ16769 361 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 HHATQ5VTY9 493 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 CDHR3Q6ZTQ4 885 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 PIGWQ7Z7B1 504 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 ATP2A3Q93084 1043 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 ZSWIM3Q96MP5 696 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 C2orf49Q9BVC5 232 aaPredicted RBP14.17□□□□□ -0.14
CLK3-204ENST00000483723 SCUBE2Q9NQ36 999 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 TXNDC16Q9P2K2 825 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 TBC1D14Q9P2M4 693 aa14.17□□□□□ -0.14
CLK3-204ENST00000483723 INTS6Q9UL03 887 aaKnown RBP14.17□□□□□ -0.14
CLK3-204ENST00000483723 ANKRD36A6QL64 1941 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.16□□□□□ -0.14
CLK3-204ENST00000483723 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.16□□□□□ -0.14
CLK3-204ENST00000483723 ERICH4A6NGS2 130 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 TCP11X1B4DZS4 312 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 VAPBO95292 243 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 PRAMEF12O95522 483 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 CYBBP04839 570 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 HADHAP40939 763 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 CSNK1DP48730 415 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 PLEKHG6Q3KR16 790 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 ZNF697Q5TEC3 545 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 FSTL4Q6MZW2 842 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 RETSATQ6NUM9 610 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 FOXR1Q6PIV2 292 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 LINGO4Q6UY18 593 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 TPGS1Q6ZTW0 290 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 CPLX4Q7Z7G2 160 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 BRSK1Q8TDC3 778 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 OTUB2Q96DC9 234 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 SRPK1Q96SB4 655 aaKnown RBP14.16□□□□□ -0.14
CLK3-204ENST00000483723 TDRD1Q9BXT4 1180 aaKnown RBP14.16□□□□□ -0.14
CLK3-204ENST00000483723 PBX4Q9BYU1 374 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 TLE6Q9H808 572 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 GGA2Q9UJY4 613 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 MYO7AQ13402 2215 aa14.16□□□□□ -0.14
CLK3-204ENST00000483723 CCDC78A2IDD5 438 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 SLC7A4O43246 635 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 TIMM44O43615 452 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 MT-CO1P00395 513 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 AHSGP02765 367 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 GABRB3P28472 473 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 CD70P32970 193 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 CCT5P48643 541 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 POLD2P49005 469 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 INSCQ1MX18 579 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 RBM23Q86U06 439 aaKnown RBP14.15□□□□□ -0.14
CLK3-204ENST00000483723 METTL3Q86U44 580 aaKnown RBP14.15□□□□□ -0.14
CLK3-204ENST00000483723 TAX1BP1Q86VP1 789 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 ZC3HC1Q86WB0 502 aaKnown RBP14.15□□□□□ -0.14
CLK3-204ENST00000483723 TMEM25Q86YD3 366 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 NDUFAF2Q8N183 169 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 DCLK2Q8N568 766 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 C2CD4AQ8NCU7 369 aaPredicted RBP14.15□□□□□ -0.14
CLK3-204ENST00000483723 OR13J1Q8NGT2 312 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 IRF7Q92985 503 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 RHOJQ9H4E5 214 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 ABCB8Q9NUT2 735 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 PLK2Q9NYY3 685 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 CHKBQ9Y259 395 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 NUP210Q8TEM1 1887 aaPredicted RBP14.15□□□□□ -0.14
CLK3-204ENST00000483723 TPP1O14773 563 aa14.15□□□□□ -0.14
CLK3-204ENST00000483723 FZD6O60353 706 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 242 ms