RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ALG1LQ6GMV1 187 aa27.1■■□□□ 1.93
CCM2-211ENST00000478582 FAM124AQ86V42 546 aa27.1■■□□□ 1.93
CCM2-211ENST00000478582 SYT12Q8IV01 421 aa27.1■■□□□ 1.93
CCM2-211ENST00000478582 CADM4Q8NFZ8 388 aa27.1■■□□□ 1.93
CCM2-211ENST00000478582 ACTL9Q8TC94 416 aa27.1■■□□□ 1.93
CCM2-211ENST00000478582 HAUS1Q96CS2 278 aa27.1■■□□□ 1.93
CCM2-211ENST00000478582 ZNF641Q96N77 438 aaPredicted RBP27.1■■□□□ 1.93
CCM2-211ENST00000478582 NUDCD1Q96RS6 583 aa27.1■■□□□ 1.93
CCM2-211ENST00000478582 PCED1AQ9H1Q7 454 aa27.1■■□□□ 1.93
CCM2-211ENST00000478582 DYRK4Q9NR20 520 aa27.1■■□□□ 1.93
CCM2-211ENST00000478582 RBM22Q9NW64 420 aaKnown RBP eCLIP27.1■■□□□ 1.93
CCM2-211ENST00000478582 KCNK3O14649 394 aa27.09■■□□□ 1.93
CCM2-211ENST00000478582 KHNYNO15037 678 aaKnown RBP27.09■■□□□ 1.93
CCM2-211ENST00000478582 SCNN1BP51168 640 aa27.09■■□□□ 1.93
CCM2-211ENST00000478582 OTUD4Q01804 1114 aaKnown RBP27.09■■□□□ 1.93
CCM2-211ENST00000478582 POM121L1PQ3SYA9 428 aa27.09■■□□□ 1.93
CCM2-211ENST00000478582 AGBL4Q5VU57 503 aa27.09■■□□□ 1.93
CCM2-211ENST00000478582 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.09■■□□□ 1.93
CCM2-211ENST00000478582 ERN2Q76MJ5 926 aaKnown RBP27.09■■□□□ 1.93
CCM2-211ENST00000478582 DEFB119Q8N690 84 aa27.09■■□□□ 1.93
CCM2-211ENST00000478582 TTC13Q8NBP0 860 aa27.09■■□□□ 1.93
CCM2-211ENST00000478582 KDM4CQ9H3R0 1056 aa27.09■■□□□ 1.93
CCM2-211ENST00000478582 NT5MQ9NPB1 228 aa27.09■■□□□ 1.93
CCM2-211ENST00000478582 TMEM74BQ9NUR3 256 aa27.09■■□□□ 1.93
CCM2-211ENST00000478582 DKK3Q9UBP4 350 aa27.09■■□□□ 1.93
CCM2-211ENST00000478582 ATP8A1Q9Y2Q0 1164 aa27.09■■□□□ 1.93
CCM2-211ENST00000478582 GON4LQ3T8J9 2241 aa27.09■■□□□ 1.93
CCM2-211ENST00000478582 KCNK1O00180 336 aa27.08■■□□□ 1.93
CCM2-211ENST00000478582 MTSS1O43312 755 aa27.08■■□□□ 1.93
CCM2-211ENST00000478582 JCHAINP01591 159 aa27.08■■□□□ 1.93
CCM2-211ENST00000478582 UGT2B4P06133 528 aa27.08■■□□□ 1.93
CCM2-211ENST00000478582 CES1P23141 567 aa27.08■■□□□ 1.93
CCM2-211ENST00000478582 PIP5KL1Q5T9C9 394 aa27.08■■□□□ 1.93
CCM2-211ENST00000478582 NCEH1Q6PIU2 408 aa27.08■■□□□ 1.93
CCM2-211ENST00000478582 ZC3H18Q86VM9 953 aaKnown RBP27.08■■□□□ 1.93
CCM2-211ENST00000478582 SLC35F6Q8N357 371 aa27.08■■□□□ 1.93
CCM2-211ENST00000478582 KLHL32Q96NJ5 620 aa27.08■■□□□ 1.93
CCM2-211ENST00000478582 QKIQ96PU8 341 aaKnown RBP eCLIP27.08■■□□□ 1.93
CCM2-211ENST00000478582 GPR174Q9BXC1 333 aa27.08■■□□□ 1.93
CCM2-211ENST00000478582 POLR1EQ9GZS1 481 aaKnown RBP27.08■■□□□ 1.93
CCM2-211ENST00000478582 SUV39H2Q9H5I1 410 aa27.08■■□□□ 1.93
CCM2-211ENST00000478582 PILRBQ9UKJ0 227 aa27.08■■□□□ 1.93
CCM2-211ENST00000478582 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP27.07■■□□□ 1.92
CCM2-211ENST00000478582 DCDC2BA2VCK2 349 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 PATE3B3GLJ2 98 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 C10orf142B7Z368 130 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 PLK4O00444 970 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 SEMA4FO95754 770 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 ITPKAP23677 461 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 ZBTB17Q13105 803 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 SLC45A4Q5BKX6 768 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 STPG1Q5TH74 334 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 PEAR1Q5VY43 1037 aaPredicted RBP27.07■■□□□ 1.92
CCM2-211ENST00000478582 SLC41A1Q8IVJ1 513 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 CNTD1Q8N815 330 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 NSMCE3Q96MG7 304 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 ATP13A3Q9H7F0 1226 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 SCUBE2Q9NQ36 999 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 SHROOM3Q8TF72 1996 aa27.07■■□□□ 1.92
CCM2-211ENST00000478582 TSPAN11A1L157 253 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 C16orf96A6NNT2 1141 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 PLRG1O43660 514 aaKnown RBP27.06■■□□□ 1.92
CCM2-211ENST00000478582 NEBLO76041 1014 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 HLA-DQB2P05538 268 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 SERPINA4P29622 427 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 HOXD12P35452 270 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 NEK3P51956 506 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 ADPRHP54922 357 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 MAXP61244 160 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 IRX4P78413 519 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 PARS2Q7L3T8 475 aaKnown RBP27.06■■□□□ 1.92
CCM2-211ENST00000478582 SLC13A5Q86YT5 568 aaPredicted RBP27.06■■□□□ 1.92
CCM2-211ENST00000478582 OR2T34Q8NGX1 318 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 FOXJ1Q92949 421 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 EDEM2Q9BV94 578 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 NOD2Q9HC29 1040 aa27.06■■□□□ 1.92
CCM2-211ENST00000478582 LNP1A1A4G5 178 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 LRRC72A6NJI9 287 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 GJB3O75712 270 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 PIGNO95427 931 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 TAS2R38P59533 333 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 EIF3EP60228 445 aaKnown RBP27.05■■□□□ 1.92
CCM2-211ENST00000478582 BCL2L1Q07817 233 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 TEX44Q53QW1 395 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 B4GALNT4Q76KP1 1039 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 CAMK1DQ8IU85 385 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 OR14C36Q8NHC7 312 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 ARRDC2Q8TBH0 407 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 SPOCK2Q92563 424 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 RAB7BQ96AH8 199 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 ECHDC3Q96DC8 303 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 HSPA12BQ96MM6 686 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 VAT1Q99536 393 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 SEMA3CQ99985 751 aa27.05■■□□□ 1.92
CCM2-211ENST00000478582 PI4KAP42356 2102 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 TCRBV7S2A1N4TA0A589 114 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 METTL12A8MUP2 240 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 H7C0C1 242 aa27.04■■□□□ 1.92
CCM2-211ENST00000478582 TRAFD1O14545 582 aaPredicted RBP27.04■■□□□ 1.92
CCM2-211ENST00000478582 ENC1O14682 589 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms