RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TERF1P54274 439 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 SLC7A5Q01650 507 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 TRAF2Q12933 501 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 PCSK7Q16549 785 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 ARSIQ5FYB1 569 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 SYCP2LQ5T4T6 812 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 KDELC1Q6UW63 502 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 MMAAQ8IVH4 418 aaKnown RBP16.35■□□□□ 0.21
VHL-203ENST00000477538 KLHDC8BQ8IXV7 354 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 SPEM1Q8N4L4 309 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 TMIEQ8NEW7 156 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 IPMKQ8NFU5 416 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 PIP4K2CQ8TBX8 421 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 VOPP1Q96AW1 172 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 ERP44Q9BS26 406 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 IER2Q9BTL4 223 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 OSBPL1AQ9BXW6 950 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 RSPH9Q9H1X1 276 aaPredicted RBP16.35■□□□□ 0.21
VHL-203ENST00000477538 PCDHGC4Q9Y5F7 938 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 RAI2Q9Y5P3 530 aa16.35■□□□□ 0.21
VHL-203ENST00000477538 TCRBV21S2A2A0A5A6 115 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 ERI2A8K979 691 aaKnown RBP16.34■□□□□ 0.21
VHL-203ENST00000477538 C1QTNF3-AMACRE9PGA6 284 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 DNALI1O14645 258 aaPredicted RBP16.34■□□□□ 0.21
VHL-203ENST00000477538 PI15O43692 258 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 IL1BP01584 269 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 APRTP07741 180 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 IVDP26440 423 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 PSMD8P48556 350 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 LMAN1P49257 510 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 DGKEP52429 567 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 WNT3AP56704 352 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 SATB1Q01826 763 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 IZUMO3Q5VZ72 239 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 ZNF776Q68DI1 518 aaPredicted RBP16.34■□□□□ 0.21
VHL-203ENST00000477538 KCTD11Q693B1 232 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 GDPD4Q6W3E5 623 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 PAF1Q8N7H5 531 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 PDCD7Q8N8D1 485 aaKnown RBP16.34■□□□□ 0.21
VHL-203ENST00000477538 PDCD6IPQ8WUM4 868 aaKnown RBP16.34■□□□□ 0.21
VHL-203ENST00000477538 SNF8Q96H20 258 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 MRGPRX2Q96LB1 330 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 ZNF641Q96N77 438 aaPredicted RBP16.34■□□□□ 0.21
VHL-203ENST00000477538 KLHL32Q96NJ5 620 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 FSD1LQ9BXM9 530 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 TDRD1Q9BXT4 1180 aaKnown RBP16.34■□□□□ 0.21
VHL-203ENST00000477538 DPH5Q9H2P9 285 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 SUV39H2Q9H5I1 410 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 LRRC40Q9H9A6 602 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 POLMQ9NP87 494 aaPredicted RBP16.34■□□□□ 0.21
VHL-203ENST00000477538 C2orf42Q9NWW7 574 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 DLGAP2Q9P1A6 1054 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 SARDHQ9UL12 918 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 PPM1HQ9ULR3 514 aa16.34■□□□□ 0.21
VHL-203ENST00000477538 KPNA3O00505 521 aaPredicted RBP16.33■□□□□ 0.2
VHL-203ENST00000477538 TRAFD1O14545 582 aaPredicted RBP16.33■□□□□ 0.2
VHL-203ENST00000477538 HTRA2O43464 458 aaPredicted RBP16.33■□□□□ 0.2
VHL-203ENST00000477538 AP2A1O95782 977 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 ADH1BP00325 375 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 RHOXF2BP0C7M4 288 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 TNNT3P45378 269 aaPredicted RBP16.33■□□□□ 0.2
VHL-203ENST00000477538 RPL21P46778 160 aaKnown RBP16.33■□□□□ 0.2
VHL-203ENST00000477538 CLCN5P51795 746 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 MTAPQ13126 283 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 SPARCL1Q14515 664 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 KCNJ11Q14654 390 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 CST6Q15828 149 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 POM121L1PQ3SYA9 428 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 ZNF805Q5CZA5 627 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 CFAP58Q5T655 872 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 ARMC12Q5T9G4 340 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 FAM46CQ5VWP2 391 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 DUPD1Q68J44 220 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 KDELC2Q7Z4H8 507 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 PCGF5Q86SE9 256 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 CACUL1Q86Y37 369 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 TMPRSS6Q8IU80 811 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 PPIL6Q8IXY8 311 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 CPT1BQ92523 772 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 IFT43Q96FT9 208 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 FEM1CQ96JP0 617 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 TBL1YQ9BQ87 522 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 RHOXF2Q9BQY4 288 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 FICDQ9BVA6 458 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 MKRN2Q9H000 416 aaKnown RBP16.33■□□□□ 0.2
VHL-203ENST00000477538 EIF2B3Q9NR50 452 aaKnown RBP16.33■□□□□ 0.2
VHL-203ENST00000477538 DMGDHQ9UI17 866 aaKnown RBP16.33■□□□□ 0.2
VHL-203ENST00000477538 TPX2Q9ULW0 747 aaKnown RBP16.33■□□□□ 0.2
VHL-203ENST00000477538 CHKBQ9Y259 395 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 SNX24Q9Y343 169 aa16.33■□□□□ 0.2
VHL-203ENST00000477538 VCANP13611 3396 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 TNFRSF10AO00220 468 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 PLXNA2O75051 1894 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 SEC31AO94979 1220 aaKnown RBP16.32■□□□□ 0.2
VHL-203ENST00000477538 PGLSO95336 258 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 GABRG2P18507 467 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 TPSB2P20231 275 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 MAGEA6P43360 314 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 METAP1P53582 386 aa16.32■□□□□ 0.2
VHL-203ENST00000477538 RPS14P62263 151 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms