RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 ILKQ13418 452 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 DPYSL2Q16555 572 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 INO80DQ53TQ3 878 aaPredicted RBP16.42■□□□□ 0.22
COL1A1-205ENST00000476387 KIAA1161Q6NSJ0 714 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 H2AFVQ71UI9 128 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 ABI3BPQ7Z7G0 1075 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 MDM1Q8TC05 714 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 TEKT4Q8WW24 435 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 LRIG1Q96JA1 1093 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 CCDC42Q96M95 316 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 OSBPL1AQ9BXW6 950 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 KLC2Q9H0B6 622 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 LRRC19Q9H756 370 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 KLHL11Q9NVR0 708 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 UVRAGQ9P2Y5 699 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 UBA2Q9UBT2 640 aaPredicted RBP16.42■□□□□ 0.22
COL1A1-205ENST00000476387 RALYQ9UKM9 306 aaKnown RBP16.42■□□□□ 0.22
COL1A1-205ENST00000476387 ZFR2Q9UPR6 939 aaKnown RBP16.42■□□□□ 0.22
COL1A1-205ENST00000476387 CA5BQ9Y2D0 317 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 GPSM3Q9Y4H4 160 aa16.42■□□□□ 0.22
COL1A1-205ENST00000476387 URB1O60287 2271 aaKnown RBP16.42■□□□□ 0.22
COL1A1-205ENST00000476387 LAMA5O15230 3695 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 FAM149AA5PLN7 773 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 AKR1B15C9JRZ8 316 aaPredicted RBP16.41■□□□□ 0.22
COL1A1-205ENST00000476387 POP4O95707 220 aaKnown RBP16.41■□□□□ 0.22
COL1A1-205ENST00000476387 TCF4P15884 667 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 CKMT2P17540 419 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 IL1R2P27930 398 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 HCAR3P49019 387 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 RPS21P63220 83 aaKnown RBP16.41■□□□□ 0.22
COL1A1-205ENST00000476387 DNAJC3Q13217 504 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 DPYSQ14117 519 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 HADHQ16836 314 aaKnown RBP16.41■□□□□ 0.22
COL1A1-205ENST00000476387 ATXN7L2Q5T6C5 722 aaPredicted RBP16.41■□□□□ 0.22
COL1A1-205ENST00000476387 FBXL19Q6PCT2 694 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 DCP2Q8IU60 420 aaKnown RBP16.41■□□□□ 0.22
COL1A1-205ENST00000476387 LZTR1Q8N653 840 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 KLK6Q92876 244 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 RAB7BQ96AH8 199 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 IFT43Q96FT9 208 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 FEM1CQ96JP0 617 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 SP110Q9HB58 689 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 CWC15Q9P013 229 aaKnown RBP16.41■□□□□ 0.22
COL1A1-205ENST00000476387 LCMT1Q9UIC8 334 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 LHX6Q9UPM6 363 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 FADS3Q9Y5Q0 445 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 HS3ST3A1Q9Y663 406 aa16.41■□□□□ 0.22
COL1A1-205ENST00000476387 DFFAO00273 331 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 PRAMEF11O60813 436 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 UGT2B4P06133 528 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 TMEM253P0C7T8 217 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 RARAP10276 462 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 GKP32189 559 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 GJC1P36383 396 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 PAPOLAP51003 745 aaKnown RBP16.4■□□□□ 0.22
COL1A1-205ENST00000476387 SLC25A11Q02978 314 aaKnown RBP16.4■□□□□ 0.22
COL1A1-205ENST00000476387 ZNF211Q13398 564 aaPredicted RBP16.4■□□□□ 0.22
COL1A1-205ENST00000476387 KRT81Q14533 505 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 ASTE1Q2TB18 679 aaPredicted RBP16.4■□□□□ 0.22
COL1A1-205ENST00000476387 MYLK3Q32MK0 819 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 PROX2Q3B8N5 592 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 ZNF805Q5CZA5 627 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 SEL1L3Q68CR1 1132 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 GCNT7Q6ZNI0 430 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 PARS2Q7L3T8 475 aaKnown RBP16.4■□□□□ 0.22
COL1A1-205ENST00000476387 MARCH9Q86YJ5 346 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 OR13H1Q8NG92 308 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 MYOCQ99972 504 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 PACSIN1Q9BY11 444 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 SLC39A8Q9C0K1 460 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 NHEJ1Q9H9Q4 299 aaPredicted RBP16.4■□□□□ 0.22
COL1A1-205ENST00000476387 FZD3Q9NPG1 666 aa16.4■□□□□ 0.22
COL1A1-205ENST00000476387 ATRXP46100 2492 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 A6NNZ2 444 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 TSPAN6O43657 245 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 SDC3O75056 442 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 JUPP14923 745 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 DGKAP23743 735 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 ACP1P24666 158 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 CYP4F3Q08477 520 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 HS1BP3Q53T59 392 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 TMCO3Q6UWJ1 677 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 KYAT3Q6YP21 454 aaKnown RBP16.39■□□□□ 0.21
COL1A1-205ENST00000476387 POLNQ7Z5Q5 900 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 CACTIN-AS1Q8N1I8 211 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 SLC25A45Q8N413 288 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 NPWQ8N729 165 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 EXOC2Q96KP1 924 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 CSPG4P5Q96PW8 444 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 CHP1Q99653 195 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 CALN1Q9BXU9 219 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 SLC17A9Q9BYT1 436 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 PDFQ9HBH1 243 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 SCUBE2Q9NQ36 999 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 GPR27Q9NS67 375 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 SPTLC3Q9NUV7 552 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 RAXQ9Y2V3 346 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 NBEAQ8NFP9 2946 aa16.39■□□□□ 0.21
COL1A1-205ENST00000476387 C16orf96A6NNT2 1141 aa16.38■□□□□ 0.21
COL1A1-205ENST00000476387 J3KR12 359 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms