RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 SLC26A11Q86WA9 606 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 DHFR2Q86XF0 187 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 FBXW8Q8N3Y1 598 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 CHPT1Q8WUD6 406 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 CD209Q9NNX6 404 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 TCF7L2Q9NQB0 619 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 KCND2Q9NZV8 630 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 DKK3Q9UBP4 350 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 CDH9Q9ULB4 789 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 COL4A1P02462 1669 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 ASTN2O75129 1339 aaPredicted RBP11.61□□□□□ -0.55
U2AF1-209ENST00000475639 A0A0B4J269 797 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 HS6ST1O60243 411 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 TRIM3O75382 744 aaPredicted RBP11.61□□□□□ -0.55
U2AF1-209ENST00000475639 HK2P52789 917 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 BTN3A2P78410 334 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 BNC1Q01954 994 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 SPIRE1Q08AE8 756 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 PRKAA1Q13131 559 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 TUBB3Q13509 450 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 INO80DQ53TQ3 878 aaPredicted RBP11.61□□□□□ -0.55
U2AF1-209ENST00000475639 WDCPQ9H6R7 721 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.61□□□□□ -0.55
U2AF1-209ENST00000475639 NDUFAF1Q9Y375 327 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 RNF11Q9Y3C5 154 aa11.61□□□□□ -0.55
U2AF1-209ENST00000475639 A0A0X1KG70 313 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 GSAPA4D1B5 854 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 PNPLA4P41247 253 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 RPS3AP61247 264 aaKnown RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 ILF2Q12905 390 aaKnown RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 TRAP1Q12931 704 aaKnown RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 SMTNL2Q2TAL5 461 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 RPTNQ6XPR3 784 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 C14orf80Q86SX3 495 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 IFNLR1Q8IU57 520 aaPredicted RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 PROX1Q92786 737 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 TMEM169Q96HH4 297 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 MLPHQ9BV36 600 aaPredicted RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 RIMS3Q9UJD0 308 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 SMCO3A2RU48 225 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 NCF1BA6NI72 391 aaPredicted RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 NCF1CA8MVU1 366 aaPredicted RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 ZNF879B4DU55 563 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 LIASO43766 372 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 SSNA1O43805 119 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 SPATA31C1P0DKV0 1188 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 NCF1P14598 390 aaPredicted RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 SLC2A4P14672 509 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 ME2P23368 584 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 PRDX5P30044 214 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 CBX5P45973 191 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 GPR1P46091 355 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 FNBP1LQ5T0N5 605 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 FAXCQ5TGI0 409 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 LLGL2Q6P1M3 1020 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 LDHDQ86WU2 507 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 TRPV3Q8NET8 790 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 FIG4Q92562 907 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 MRPS31Q92665 395 aaKnown RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 ISOC1Q96CN7 298 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 RNF145Q96MT1 663 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 OSGEPL1Q9H4B0 414 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 RIOX1Q9H6W3 641 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 AP3M1Q9Y2T2 418 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 CYB561D2O14569 222 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 RECQL5O94762 991 aaPredicted RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 SLITRK3O94933 977 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 INHBBP09529 407 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 NELFEP18615 380 aaKnown RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 ITGA3P26006 1051 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 CLK2P49760 499 aaKnown RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 COPZ1P61923 177 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 GPR180Q86V85 440 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 LILRA2Q8N149 483 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 SIX5Q8N196 739 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 NEDD1Q8NHV4 660 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 APBB2Q92870 758 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 NSMCE3Q96MG7 304 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 ACOX2Q99424 681 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 TRIT1Q9H3H1 467 aaKnown RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 NUP98P52948 1817 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 ERI2A8K979 691 aaKnown RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 GARTP22102 1010 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 OR1G1P47890 313 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 GSSP48637 474 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 RALGDSQ12967 914 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 ITGADQ13349 1161 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 ADGRE1Q14246 886 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 SMCO1Q147U7 214 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 STARD3Q14849 445 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 CYP2A13Q16696 494 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 RGS21Q2M5E4 152 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 TDRD10Q5VZ19 366 aaKnown RBP11.6□□□□□ -0.55
U2AF1-209ENST00000475639 CBWD2Q8IUF1 395 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 FAM71AQ8IYT1 594 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 OR6J1Q8NGC5 347 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 TBCDQ9BTW9 1192 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 TMEM106CQ9BVX2 250 aa11.6□□□□□ -0.55
U2AF1-209ENST00000475639 TMEM8AQ9HCN3 771 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms