RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 RNF157Q96PX1 679 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 MTMR9Q96QG7 549 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 SLC25A23Q9BV35 468 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 PRDM12Q9H4Q4 367 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 STON1Q9Y6Q2 735 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 ANKRD12Q6UB98 2062 aa11.05□□□□□ -0.64
VAPB-204ENST00000475243 GTPBP1O00178 669 aaKnown RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 ERAL1O75616 437 aaKnown RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 SNRPB2P08579 225 aaKnown RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 PIK3CGP48736 1102 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 TTPAP49638 278 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 RHAGQ02094 409 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 DUSP4Q13115 394 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 OR5B17Q8NGF7 314 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 EPB41L1Q9H4G0 881 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 MYH11P35749 1972 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 YDJCA8MPS7 323 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 MEIS2O14770 477 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 RPL22P35268 128 aaKnown RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 FSTL1Q12841 308 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 ARMC8Q8IUR7 673 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 KBTBD2Q8IY47 623 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 CHPFQ8IZ52 775 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 IDI2Q9BXS1 227 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 NUAK2Q9H093 628 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 MYH7P12883 1935 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 RXRGP48443 463 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 SP3Q02447 781 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 VSIG10LQ86VR7 867 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 ZNF655Q8N720 491 aaPredicted RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 C18orf25Q96B23 403 aaPredicted RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 VPS35Q96QK1 796 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 NEDD8-MDP1E9PL57 170 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 PSMD10O75832 226 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 SLC25A14O95258 325 aaPredicted RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 PPIDQ08752 370 aaKnown RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 FAM171BQ6P995 826 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 CDT1Q9H211 546 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 SASH3O75995 380 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 TKTP29401 623 aaKnown RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 CHKAP35790 457 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 BUD31P41223 144 aaPredicted RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 ST3GAL1Q11201 340 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 IL17AQ16552 155 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 MIIPQ5JXC2 388 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 CRTC3Q6UUV7 619 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 STARD8Q92502 1023 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 FAM84AQ96KN4 292 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 MRPL45Q9BRJ2 306 aaKnown RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 MAT2BQ9NZL9 334 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 SLC9A3R1O14745 358 aaPredicted RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 ADCY6O43306 1168 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 JAK1P23458 1154 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 PROSER1Q86XN7 944 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 FIBCD1Q8N539 461 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 SCAIQ8N9R8 606 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 BRD9Q9H8M2 597 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 ACSS2Q9NR19 701 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 ATAD3AQ9NVI7 634 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 ASTN1O14525 1302 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 IQGAP1P46940 1657 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 DEPDC5O75140 1603 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 ASNA1O43681 348 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 UQCRBP14927 111 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 MSLNQ13421 630 aaPredicted RBP11.04□□□□□ -0.64
VAPB-204ENST00000475243 QRFPRQ96P65 431 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 EGFL7Q9UHF1 273 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 ENOPH1Q9UHY7 261 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 TNFSF13BQ9Y275 285 aa11.04□□□□□ -0.64
VAPB-204ENST00000475243 PDE4DIPQ5VU43 2346 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 NDUFV1P49821 464 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 USP46P62068 366 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 CAPSQ13938 189 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 ARHGAP36Q6ZRI8 547 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 OFCC1Q8IZS5 231 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 ALLCQ8N6M5 410 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 TMEM161BQ8NDZ6 487 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 PIWIL2Q8TC59 973 aaKnown RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 LINGO1Q96FE5 620 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 GINS4Q9BRT9 223 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 CLEC4MQ9H2X3 399 aaPredicted RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 TRIT1Q9H3H1 467 aaKnown RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 PXDNQ92626 1479 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 MYH8P13535 1937 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 MSX2P35548 267 aaPredicted RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 C21orf59P57076 290 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 EVX2Q03828 476 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 DMPKQ09013 629 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 EPS8Q12929 822 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 DGUOKQ16854 277 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 USP41Q3LFD5 358 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 ANKRD52Q8NB46 1076 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 OR52L1Q8NGH7 329 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 IL31RAQ8NI17 732 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 AENQ8WTP8 325 aaKnown RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 TRAPPC9Q96Q05 1148 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 NXF3Q9H4D5 531 aaKnown RBP11.03□□□□□ -0.64
VAPB-204ENST00000475243 FRMPD1Q5SYB0 1578 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 DIP2CQ9Y2E4 1556 aa11.03□□□□□ -0.64
VAPB-204ENST00000475243 ULK1O75385 1050 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms