RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 HUS1O60921 280 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 RECQL4O94761 1208 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 BMP10O95393 424 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 HSPA8P11142 646 aaKnown RBP14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 NPR3P17342 541 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 TKTL1P51854 596 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 PRKCQQ04759 706 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 GALNT2Q10471 571 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 SEMA3BQ13214 749 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 ZNF554Q86TJ5 538 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 NTAN1Q96AB6 310 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 CELF6Q96J87 481 aaKnown RBP14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 ZNF560Q96MR9 790 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 SLC9A7Q96T83 725 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 UHRF1Q96T88 793 aaPredicted RBP14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 CDHR5Q9HBB8 845 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 PLGRKTQ9HBL7 147 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 CHST12Q9NRB3 414 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 KLK14Q9P0G3 267 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 CD300AQ9UGN4 299 aa14.37□□□□□ -0.11
NHLRC3-204ENST00000473371 I6L893 689 aaPredicted RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 NFKBIEO00221 500 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 SOCS2O14508 198 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 PSMD3O43242 534 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 USP2O75604 605 aaPredicted RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 RPL10P27635 214 aaKnown RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 LRPAP1P30533 357 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 DNAJB13P59910 316 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 C1QTNF8P60827 252 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 CSHL1Q14406 222 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 PPP4R4Q6NUP7 873 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 ESRP1Q6NXG1 681 aaKnown RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 CROCCP3Q8IVE0 287 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 ZNF786Q8N393 782 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 SPATA22Q8NHS9 363 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 TRPM4Q8TD43 1214 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 PPP1R14BQ96C90 147 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 DUS3LQ96G46 650 aaKnown RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 HNRNPABQ99729 332 aaKnown RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 SLC25A23Q9BV35 468 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 OSBPL6Q9BZF3 934 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 NXF3Q9H4D5 531 aaKnown RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 EML4Q9HC35 981 aaKnown RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 DUS2Q9NX74 493 aaKnown RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 CROCCQ5TZA2 2017 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 A0A087WXM4 84 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 PIRO00625 290 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 NRP1O14786 923 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 NRP2O60462 931 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 DNAJB2P25686 324 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 HOXA11P31270 313 aaPredicted RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 GRIA3P42263 894 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 POLD2P49005 469 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 SLC7A2P52569 658 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 RABGGTBP53611 331 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 LAMC2Q13753 1193 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 NHSL2Q5HYW2 709 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 PITRM1Q5JRX3 1037 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 INTS6LQ5JSJ4 861 aaKnown RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 C6orf10Q5SRN2 563 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 RPS27LQ71UM5 84 aaKnown RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 OSTM1Q86WC4 334 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 IPMKQ8NFU5 416 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 TCF12Q99081 682 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 MEAF6Q9HAF1 191 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 WDR6Q9NNW5 1121 aaKnown RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 DDIT4Q9NX09 232 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 ZNF510Q9Y2H8 683 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 A0A087X1B8 175 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 MT-CO1P00395 513 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 CD4P01730 458 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 YBX3P16989 372 aaKnown RBP eCLIP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 HCAR3P49019 387 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 TAF6P49848 677 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 ENTPD1P49961 510 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 AIF1P55008 147 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 PPIL2Q13356 520 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 ARL13BQ3SXY8 428 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 ZNF280DQ6N043 979 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 TTC33Q6PID6 262 aaPredicted RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 CUZD1Q86UP6 607 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 BBS5Q8N3I7 341 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 ANKFN1Q8N957 763 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 PPHLN1Q8NEY8 458 aaKnown RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 CANT1Q8WVQ1 401 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 RANBP9Q96S59 729 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 TBL1YQ9BQ87 522 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 SLC39A3Q9BRY0 314 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 ULBP1Q9BZM6 244 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 TXNRD2Q9NNW7 524 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 VPS45Q9NRW7 570 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 TMEM181Q9P2C4 612 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 GMPR2Q9P2T1 348 aaKnown RBP14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 EBF1Q9UH73 591 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 TLL2Q9Y6L7 1015 aa14.36□□□□□ -0.11
NHLRC3-204ENST00000473371 SLC1A2P43004 574 aa14.35□□□□□ -0.11
NHLRC3-204ENST00000473371 CD151P48509 253 aa14.35□□□□□ -0.11
NHLRC3-204ENST00000473371 PLK1P53350 603 aa14.35□□□□□ -0.11
NHLRC3-204ENST00000473371 MAP3K7CLP57077 242 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms