RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 CDC23Q9UJX2 597 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 LHX6Q9UPM6 363 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 DMTF1Q9Y222 760 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.76□□□□□ -0.53
HLA-C-206ENST00000470363 SNX10Q9Y5X0 201 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 ACACAQ13085 2346 aa11.76□□□□□ -0.53
HLA-C-206ENST00000470363 ARID1BQ8NFD5 2236 aaPredicted RBP11.75□□□□□ -0.53
HLA-C-206ENST00000470363 LRRD1A4D1F6 860 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 FAM149AA5PLN7 773 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 GOLGA8CPA6NN73 597 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 PDE2AO00408 941 aaPredicted RBP11.75□□□□□ -0.53
HLA-C-206ENST00000470363 YKT6O15498 198 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 ZMPSTE24O75844 475 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 CD160O95971 181 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 F9P00740 461 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 CD48P09326 243 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 PRLRP16471 622 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 TCP1P17987 556 aaKnown RBP11.75□□□□□ -0.53
HLA-C-206ENST00000470363 NUDT1P36639 197 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 ACADVLP49748 655 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 OVGP1Q12889 678 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 ACCSLQ4AC99 568 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 ERMARDQ5T6L9 678 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 LRRC38Q5VT99 294 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 FAM46CQ5VWP2 391 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 DHRS13Q6UX07 377 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 MFSD7Q6UXD7 560 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 DSG4Q86SJ6 1040 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 TMPRSS12Q86WS5 348 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 CCDC50Q8IVM0 306 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 KATNAL2Q8IYT4 538 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 PYROXD2Q8N2H3 581 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 PBKQ96KB5 322 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 HERPUD2Q9BSE4 406 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 DHX35Q9H5Z1 703 aaKnown RBP11.75□□□□□ -0.53
HLA-C-206ENST00000470363 GDF3Q9NR23 364 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.75□□□□□ -0.53
HLA-C-206ENST00000470363 TMEM51Q9NW97 253 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 FTSJ1Q9UET6 329 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 VPS51Q9UID3 782 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 SLC25A13Q9UJS0 675 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 VPS28Q9UK41 221 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 RAXQ9Y2V3 346 aa11.75□□□□□ -0.53
HLA-C-206ENST00000470363 DOCK4Q8N1I0 1966 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 GOLGA4Q13439 2230 aaKnown RBP11.74□□□□□ -0.53
HLA-C-206ENST00000470363 ZRANB2O95218 330 aaKnown RBP eCLIP11.74□□□□□ -0.53
HLA-C-206ENST00000470363 LDOC1O95751 146 aaPredicted RBP11.74□□□□□ -0.53
HLA-C-206ENST00000470363 ITGAVP06756 1048 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 KRT7P08729 469 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 C1SP09871 688 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 KDELR1P24390 212 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 MAT2AP31153 395 aaKnown RBP11.74□□□□□ -0.53
HLA-C-206ENST00000470363 ADRA1BP35368 520 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 CDH6P55285 790 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 CYP4F3Q08477 520 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 MMRN1Q13201 1228 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 DNAJC3Q13217 504 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 ZNF284Q2VY69 593 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 INAVAQ3KP66 663 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 POM121L1PQ3SYA9 428 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 BOLA3Q53S33 107 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 ACBD5Q5T8D3 534 aaPredicted RBP11.74□□□□□ -0.53
HLA-C-206ENST00000470363 NEK5Q6P3R8 708 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 POLNQ7Z5Q5 900 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 PRPF39Q86UA1 669 aaKnown RBP11.74□□□□□ -0.53
HLA-C-206ENST00000470363 CREG2Q8IUH2 290 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 RCOR2Q8IZ40 523 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 SLC25A45Q8N413 288 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 PDCD7Q8N8D1 485 aaKnown RBP11.74□□□□□ -0.53
HLA-C-206ENST00000470363 DCAF4L2Q8NA75 395 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 KCTD6Q8NC69 237 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 ARRDC3Q96B67 414 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 HAPLN3Q96S86 360 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 KCTD15Q96SI1 283 aaPredicted RBP11.74□□□□□ -0.53
HLA-C-206ENST00000470363 NCAPGQ9BPX3 1015 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 HEMGNQ9BXL5 484 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 CARD9Q9H257 536 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 PREBQ9HCU5 417 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 SCUBE2Q9NQ36 999 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 DDX56Q9NY93 547 aaKnown RBP11.74□□□□□ -0.53
HLA-C-206ENST00000470363 MPP6Q9NZW5 540 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 FZD10Q9ULW2 581 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 AP4E1Q9UPM8 1137 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 MRFAP1Q9Y605 127 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 IGSF10Q6WRI0 2623 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 BPTFQ12830 3046 aa11.74□□□□□ -0.53
HLA-C-206ENST00000470363 URB1O60287 2271 aaKnown RBP11.74□□□□□ -0.53
HLA-C-206ENST00000470363 A0A087WV48 116 aa11.73□□□□□ -0.53
HLA-C-206ENST00000470363 TCRBV7S2A1N4TA0A589 114 aa11.73□□□□□ -0.53
HLA-C-206ENST00000470363 ILVBLA1L0T0 632 aa11.73□□□□□ -0.53
HLA-C-206ENST00000470363 C3orf70A6NLC5 250 aaPredicted RBP11.73□□□□□ -0.53
HLA-C-206ENST00000470363 E9PAM4 449 aa11.73□□□□□ -0.53
HLA-C-206ENST00000470363 C1QTNF3-AMACRE9PGA6 284 aa11.73□□□□□ -0.53
HLA-C-206ENST00000470363 PRAMEF26H0Y7S4 382 aa11.73□□□□□ -0.53
HLA-C-206ENST00000470363 RNGTTO60942 597 aaKnown RBP11.73□□□□□ -0.53
HLA-C-206ENST00000470363 GIMD1P0DJR0 217 aa11.73□□□□□ -0.53
HLA-C-206ENST00000470363 CDK4P11802 303 aa11.73□□□□□ -0.53
HLA-C-206ENST00000470363 KRT10P13645 584 aa11.73□□□□□ -0.53
HLA-C-206ENST00000470363 GLDCP23378 1020 aa11.73□□□□□ -0.53
HLA-C-206ENST00000470363 CHRNA3P32297 505 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms