RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 LIN9Q5TKA1 542 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 ARL6IP6Q8N6S5 226 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 LNX1Q8TBB1 728 aaPredicted RBP10.05□□□□□ -0.8
NUP50-214ENST00000469163 SPATA18Q8TC71 538 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 ATG4AQ8WYN0 398 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 RANBP9Q96S59 729 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 SEPT5Q99719 369 aaPredicted RBP10.05□□□□□ -0.8
NUP50-214ENST00000469163 APOL5Q9BWW9 433 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 GANQ9H2C0 597 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 C17orf75Q9HAS0 396 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 KLQ9UEF7 1012 aa10.05□□□□□ -0.8
NUP50-214ENST00000469163 MYH9P35579 1960 aaKnown RBP10.05□□□□□ -0.8
NUP50-214ENST00000469163 ARFGEF1Q9Y6D6 1849 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 CCDC85CA6NKD9 419 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 CYB561D2O14569 222 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 KPNA6O60684 536 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 DNAJB5O75953 348 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 LYPLA2O95372 231 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 ZNF23P17027 643 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 OXA1LQ15070 435 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 TAF5Q15542 800 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.04□□□□□ -0.8
NUP50-214ENST00000469163 KRT80Q6KB66 452 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 TMPRSS6Q8IU80 811 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 CPA6Q8N4T0 437 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 RBM15BQ8NDT2 890 aaKnown RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 GRK7Q8WTQ7 553 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 AUTS2Q8WXX7 1259 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 PTCD3Q96EY7 689 aaKnown RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 ZNF512Q96ME7 567 aaPredicted RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 TTC25Q96NG3 672 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 TWNKQ96RR1 684 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 PCDHB18PQ96TA0 734 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 MRPL45Q9BRJ2 306 aaKnown RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 CHID1Q9BWS9 393 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 SYTL2Q9HCH5 934 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 TOR4AQ9NXH8 423 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 ZC3H7BQ9UGR2 993 aaKnown RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 SLC27A5Q9Y2P5 690 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 CCDC78A2IDD5 438 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 FAM47DPA6NHR8 397 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 A8MUA0 341 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 LINC01387J3KSC0 135 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 ATE1O95260 518 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 IFI30P13284 250 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 CD247P20963 164 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 GARTP22102 1010 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 GNL1P36915 607 aaPredicted RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 RPL7AP62424 266 aaKnown RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 MRPS6P82932 125 aaKnown RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 RBP5P82980 135 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 TMED2Q15363 201 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 PGM2L1Q6PCE3 622 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 ZNF704Q6ZNC4 412 aaPredicted RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 FBXL6Q8N531 539 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 BEND7Q8N7W2 519 aaPredicted RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 FBXO27Q8NI29 283 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 IPCEF1Q8WWN9 437 aaPredicted RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 ZNF606Q8WXB4 792 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 MCMBPQ9BTE3 642 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 TXLNGYQ9BZA5 131 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 NIF3L1Q9GZT8 377 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 LRRC4Q9HBW1 653 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 ATP13A2Q9NQ11 1180 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 BOLA1Q9Y3E2 137 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 CASP8AP2Q9UKL3 1982 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 MSI1O43347 362 aaKnown RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 THP07101 528 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 RARGP13631 454 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 HSPA6P17066 643 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 PSMA2P25787 234 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 ALDH1A3P47895 512 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 ARHGDIBP52566 201 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 CDH15P55291 814 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 WDR4P57081 412 aaKnown RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 OCA2Q04671 838 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 TARBP2Q15633 366 aaKnown RBP10.04□□□□□ -0.8
NUP50-214ENST00000469163 GOLGA7BQ2TAP0 167 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 AGAP7PQ5VUJ5 663 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 GPR107Q5VW38 600 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 GLB1LQ6UWU2 654 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 OTOAQ7RTW8 1153 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 PCGF5Q86SE9 256 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 GPR180Q86V85 440 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 RASSF5Q8WWW0 418 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 RUNDC3BQ96NL0 473 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 CGRRF1Q99675 332 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 PSD2Q9BQI7 771 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 TMEM246Q9BRR3 403 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 TIGARQ9NQ88 270 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 GRID1Q9ULK0 1009 aa10.04□□□□□ -0.8
NUP50-214ENST00000469163 SMIM28A0A1B0GU29 152 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 NUAK1O60285 661 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 VNN1O95497 513 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 IFNA14P01570 189 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 COMTP21964 271 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 MAP4P27816 1152 aaKnown RBP10.03□□□□□ -0.8
NUP50-214ENST00000469163 PKLRP30613 574 aa10.03□□□□□ -0.8
NUP50-214ENST00000469163 GALK2Q01415 458 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms