RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 UBAP2Q5T6F2 1119 aaKnown RBP6.19□□□□□ -1.42
PTCD3-205ENST00000464541 NEK10Q6ZWH5 1172 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 MOB3CQ70IA8 216 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-205ENST00000464541 CLEC18CQ8NCF0 446 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 THOC3Q96J01 351 aaKnown RBP6.19□□□□□ -1.42
PTCD3-205ENST00000464541 SNTG1Q9NSN8 517 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 CARD8Q9Y2G2 431 aa6.19□□□□□ -1.42
PTCD3-205ENST00000464541 LACTBL1A8MY62 500 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 SRD5A1P18405 259 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 CCKARP32238 428 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 FOXD4Q12950 439 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-205ENST00000464541 CAPSQ13938 189 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 RUNX2Q13950 521 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 TAF11Q15544 211 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 EFHC1Q5JVL4 640 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 PLD5Q8N7P1 536 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 FAM216AQ8WUB2 273 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 ST8SIA4Q92187 359 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 SNAPC3Q92966 411 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 RNF125Q96EQ8 232 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 C9orf78Q9NZ63 289 aaPredicted RBP6.18□□□□□ -1.42
PTCD3-205ENST00000464541 MPP6Q9NZW5 540 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 TMEM98Q9Y2Y6 226 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 CYP46A1Q9Y6A2 500 aa6.18□□□□□ -1.42
PTCD3-205ENST00000464541 KDM4EB2RXH2 506 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-205ENST00000464541 TAF4O00268 1085 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 MTA2O94776 668 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 HEXAP06865 529 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 TFPIP10646 304 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 POU1F1P28069 291 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 ERV3-1Q14264 604 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 INTS11Q5TA45 600 aaKnown RBP6.17□□□□□ -1.42
PTCD3-205ENST00000464541 MMS22LQ6ZRQ5 1243 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 MIGA1Q8NAN2 632 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 OR14A16Q8NHC5 309 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 ZNF479Q96JC4 524 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 MMTAG2Q9BU76 263 aaKnown RBP6.17□□□□□ -1.42
PTCD3-205ENST00000464541 SEZ6LQ9BYH1 1024 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 HIPK2Q9H2X6 1198 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 JMJD4Q9H9V9 463 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 CLK4Q9HAZ1 481 aaKnown RBP6.17□□□□□ -1.42
PTCD3-205ENST00000464541 VEZTQ9HBM0 779 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 TMEM51Q9NW97 253 aa6.17□□□□□ -1.42
PTCD3-205ENST00000464541 AGO1Q9UL18 857 aaKnown RBP6.17□□□□□ -1.42
PTCD3-205ENST00000464541 IGKV2D-30A0A075B6S6 120 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 A0A0U1RQF3 1178 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 A0A1B0GVM2 712 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 KLRF2D3W0D1 207 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 GALTP07902 379 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 NGFRP08138 427 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 IRF1P10914 325 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 CHATP28329 748 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 PAFAH1B1P43034 410 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 GABRB2P47870 512 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 PCYT1AP49585 367 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 UFM1P61960 85 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 LTBQ06643 244 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 TDGQ13569 410 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 MYBPC2Q14324 1141 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 HIST2H2ACQ16777 129 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-205ENST00000464541 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 KLHL24Q6TFL4 600 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 LURAP1LQ8IV03 231 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 MB21D2Q8IYB1 491 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-205ENST00000464541 NFKBIDQ8NI38 313 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 GPT2Q8TD30 523 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 MEIS3Q99687 375 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 ZPBPQ9BS86 351 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 TTYH1Q9H313 450 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-205ENST00000464541 UBN1Q9NPG3 1134 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 SMYD2Q9NRG4 433 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 KCND2Q9NZV8 630 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 PAM16Q9Y3D7 125 aa6.16□□□□□ -1.42
PTCD3-205ENST00000464541 TEX13CA0A0J9YWL9 993 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 CCDC189A1A4V9 331 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 HSPB2A8KAH6 182 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 WNT9BO14905 357 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 ATP2C2O75185 946 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 NDUFB4O95168 129 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 F9P00740 461 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 PRSS2P07478 247 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 CBSLP0DN79 551 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 ITGB6P18564 788 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 CBSP35520 551 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 CLCN5P51795 746 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 ZXDBP98169 803 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 PTP4A2Q12974 167 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 CTTNQ14247 550 aaKnown RBP6.15□□□□□ -1.42
PTCD3-205ENST00000464541 VEPH1Q14D04 833 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 HSPB2Q16082 182 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 ESCO2Q56NI9 601 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 SLC9C2Q5TAH2 1124 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 INO80CQ6PI98 192 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-205ENST00000464541 GPAT4Q86UL3 456 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 ARMC8Q8IUR7 673 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 NAXEQ8NCW5 288 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 GJC3Q8NFK1 279 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 ADAMTS14Q8WXS8 1223 aa6.15□□□□□ -1.42
PTCD3-205ENST00000464541 TRIB2Q92519 343 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms