RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TSPY26PQ9H489 355 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 PDZD7Q9H5P4 517 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 LMAN1LQ9HAT1 526 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 PTPRHQ9HD43 1115 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 AGPAT3Q9NRZ7 376 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 LANCL2Q9NS86 450 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 GDE1Q9NZC3 331 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 KCND2Q9NZV8 630 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 TBX20Q9UMR3 447 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 HES2Q9Y543 173 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SETXQ7Z333 2677 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 EVPLQ92817 2033 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 PHLPP2Q6ZVD8 1323 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 KAT6AQ92794 2004 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 A0A1B0GTW7 788 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 ZAR1LA6NP61 321 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 INO80B-WBP1J3KQ70 363 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 AKAP3O75969 853 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 POMCP01189 267 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 PRKCBP05771 671 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 MYL1P05976 194 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 CCDC192P0DO97 292 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 EGR2P11161 476 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 HARSP12081 509 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 ZNF18P17022 549 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SFPQP23246 707 aaKnown RBP eCLIP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 CCNE1P24864 410 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 MTNR1BP49286 362 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 CYP2J2P51589 502 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SATB1Q01826 763 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SCAPQ12770 1279 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SRSF5Q13243 272 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SF3A2Q15428 464 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 KNOP1Q1ED39 458 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 USP41Q3LFD5 358 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SOWAHCQ53LP3 525 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 COBLL1Q53SF7 1204 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 LMBRD2Q68DH5 695 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 TANGO2Q6ICL3 276 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 FAM180AQ6UWF9 173 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 CBWD2Q8IUF1 395 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 TRIML1Q8N9V2 468 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 DEPTORQ8TB45 409 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 SYAP1Q96A49 352 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 ELSPBP1Q96BH3 223 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 RNF31Q96EP0 1072 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 KXD1Q9BQD3 176 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 CLSTN3Q9BQT9 956 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 COLEC11Q9BWP8 271 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 CDT1Q9H211 546 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 ST6GALNAC4Q9H4F1 302 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 PRDM13Q9H4Q3 707 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 RSAD1Q9HA92 442 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 UBN1Q9NPG3 1134 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 HEBP1Q9NRV9 189 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 AGPAT5Q9NUQ2 364 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 ANO10Q9NW15 660 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 DMAC2Q9NW81 257 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 MIOSQ9NXC5 875 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 LARSQ9P2J5 1176 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 DNMT3BQ9UBC3 853 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 CACNG4Q9UBN1 327 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 FBXW11Q9UKB1 542 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 PRG3Q9Y2Y8 225 aaPredicted RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 NFE2L3Q9Y4A8 694 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 DSPP15924 2871 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 LOXHD1Q8IVV2 1947 aa3.85□□□□□ -1.79
SCFD1-204ENST00000463622 ASH1LQ9NR48 2969 aaKnown RBP3.85□□□□□ -1.79
SCFD1-204ENST00000463622 DENND4AQ7Z401 1863 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 TCRBV7S2A1N4TA0A589 114 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 ARL5CA6NH57 179 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 F8W810 466 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 EIF3DO15371 548 aaKnown RBP eCLIP3.84□□□□□ -1.79
SCFD1-204ENST00000463622 PIGRP01833 764 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 NR3C1P04150 777 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 AMY1AP04745 511 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 TRIM49P0CI25 452 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 TRIM49CP0CI26 452 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 HKR1P10072 659 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 RPL17P18621 184 aaKnown RBP3.84□□□□□ -1.79
SCFD1-204ENST00000463622 FCARP24071 287 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 ACOT2P49753 483 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 KLK7P49862 253 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 GUCY2FP51841 1108 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 OSTNP61366 133 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 CREMQ03060 361 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 SPAG1Q07617 926 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 WDR5BQ86VZ2 330 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 SPATS2Q86XZ4 545 aaKnown RBP3.84□□□□□ -1.79
SCFD1-204ENST00000463622 MLKLQ8NB16 471 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 LNX1Q8TBB1 728 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-204ENST00000463622 TCP11Q8WWU5 503 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 LINC00476Q8WZB0 136 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 FAM3CQ92520 227 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 MARS2Q96GW9 593 aaKnown RBP3.84□□□□□ -1.79
SCFD1-204ENST00000463622 FUBP3Q96I24 572 aaKnown RBP eCLIP3.84□□□□□ -1.79
SCFD1-204ENST00000463622 ZC3H10Q96K80 434 aaKnown RBP3.84□□□□□ -1.79
SCFD1-204ENST00000463622 Q96MF0 132 aa3.84□□□□□ -1.79
SCFD1-204ENST00000463622 NAP1L5Q96NT1 182 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-204ENST00000463622 ACCSQ96QU6 501 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms