RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 OR6K2Q8NGY2 324 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 SYN2Q92777 582 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-207ENST00000461798 CENPTQ96BT3 561 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 KLHL32Q96NJ5 620 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 ISCUQ9H1K1 167 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 PDFQ9HBH1 243 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 LHX3Q9UBR4 397 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 CSNK1G3Q9Y6M4 447 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 APC2O95996 2303 aa9.28□□□□□ -0.92
BRCA1-207ENST00000461798 ANKRD11Q6UB99 2663 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-207ENST00000461798 GOLGA4Q13439 2230 aaKnown RBP9.27□□□□□ -0.93
BRCA1-207ENST00000461798 TSPAN11A1L157 253 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 FAM149AA5PLN7 773 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 NEMP2A6NFY4 417 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 TMCO5BA8MYB1 307 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 FPGTO14772 594 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 SCAMP1O15126 338 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 ZZEF1O43149 2961 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 PRAMEF11O60813 436 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 SDC3O75056 442 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 MYBL1P10243 752 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 CKMT1AP12532 417 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 JUPP14923 745 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 NME1P15531 152 aaKnown RBP9.27□□□□□ -0.93
BRCA1-207ENST00000461798 MIPP30301 263 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 HNF1BP35680 557 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 PBX1P40424 430 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 TPI1P60174 286 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 RHOAP61586 193 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 HNRNPKP61978 463 aaKnown RBP eCLIP9.27□□□□□ -0.93
BRCA1-207ENST00000461798 KLHL30Q0D2K2 578 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 GRM3Q14832 879 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 RTP5Q14D33 572 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 ACAP1Q15027 740 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 CA9Q16790 459 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 TMEM52BQ4KMG9 183 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 CCDC157Q569K6 752 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 CAVIN1Q6NZI2 390 aaKnown RBP9.27□□□□□ -0.93
BRCA1-207ENST00000461798 CYP4V2Q6ZWL3 525 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-207ENST00000461798 MARCH9Q86YJ5 346 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 ZNF454Q8N9F8 522 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 MDM1Q8TC05 714 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 ZNF641Q96N77 438 aaPredicted RBP9.27□□□□□ -0.93
BRCA1-207ENST00000461798 MYOCQ99972 504 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 CALN1Q9BXU9 219 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 SLC39A8Q9C0K1 460 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 USP29Q9HBJ7 922 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 UCKL1Q9NWZ5 548 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 NLGN3Q9NZ94 848 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 CNOT8Q9UFF9 292 aaKnown RBP9.27□□□□□ -0.93
BRCA1-207ENST00000461798 AP4E1Q9UPM8 1137 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 GPSM3Q9Y4H4 160 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 ACACAQ13085 2346 aa9.27□□□□□ -0.93
BRCA1-207ENST00000461798 PTPRBP23467 1997 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 ZFYVE26Q68DK2 2539 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 ASPMQ8IZT6 3477 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 A0A1W2PQJ5 194 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 CFAP69A5D8W1 941 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 ARHGAP42A6NI28 874 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 J3KR12 359 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 EEF2KO00418 725 aaKnown RBP9.26□□□□□ -0.93
BRCA1-207ENST00000461798 NEMP1O14524 444 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 TPP1O14773 563 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 INSIG1O15503 277 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 LRCH4O75427 683 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 TM7SF2O76062 418 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 RNF8O76064 485 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 ALPPL2P10696 532 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 ERCC2P18074 760 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 PCK1P35558 622 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 PAPOLAP51003 745 aaKnown RBP9.26□□□□□ -0.93
BRCA1-207ENST00000461798 YPEL5P62699 121 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 CYP4F3Q08477 520 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 NSUN2Q08J23 767 aaKnown RBP eCLIP9.26□□□□□ -0.93
BRCA1-207ENST00000461798 TARDBPQ13148 414 aaKnown RBP eCLIP9.26□□□□□ -0.93
BRCA1-207ENST00000461798 RFTN1Q14699 578 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-207ENST00000461798 AGERQ15109 404 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 UGP2Q16851 508 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 KLHL40Q2TBA0 621 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 BOLA3Q53S33 107 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 HS1BP3Q53T59 392 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 HES3Q5TGS1 186 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 HGSNATQ68CP4 663 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 RFX8Q6ZV50 586 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 PTAR1Q7Z6K3 402 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-207ENST00000461798 PARGQ86W56 976 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 ZNF354CQ86Y25 554 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 DNAAF5Q86Y56 855 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 ARHGAP12Q8IWW6 846 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 LZTR1Q8N653 840 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 DCBLD1Q8N8Z6 715 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 TRIM11Q96F44 468 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 TBATAQ96M53 351 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 TUBGCP5Q96RT8 1024 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 PEBP4Q96S96 227 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 KCTD15Q96SI1 283 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-207ENST00000461798 SNRNP25Q9BV90 132 aaKnown RBP9.26□□□□□ -0.93
BRCA1-207ENST00000461798 DUSP23Q9BVJ7 150 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 TRIM7Q9C029 511 aa9.26□□□□□ -0.93
BRCA1-207ENST00000461798 NRSN2Q9GZP1 204 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms