RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 CNOT3O75175 753 aaKnown RBP4□□□□□ -1.77
CLK1-206ENST00000461326 EIF2S1P05198 315 aaKnown RBP4□□□□□ -1.77
CLK1-206ENST00000461326 RGS2P41220 211 aa4□□□□□ -1.77
CLK1-206ENST00000461326 DPP6P42658 865 aa4□□□□□ -1.77
CLK1-206ENST00000461326 AIMP2Q13155 320 aaKnown RBP4□□□□□ -1.77
CLK1-206ENST00000461326 CRYMQ14894 314 aa4□□□□□ -1.77
CLK1-206ENST00000461326 WTAPQ15007 396 aa4□□□□□ -1.77
CLK1-206ENST00000461326 RNPS1Q15287 305 aaKnown RBP4□□□□□ -1.77
CLK1-206ENST00000461326 SYTL3Q4VX76 610 aa4□□□□□ -1.77
CLK1-206ENST00000461326 UBAP2Q5T6F2 1119 aaKnown RBP4□□□□□ -1.77
CLK1-206ENST00000461326 ZNF793Q6ZN11 406 aa4□□□□□ -1.77
CLK1-206ENST00000461326 TECPR1Q7Z6L1 1165 aa4□□□□□ -1.77
CLK1-206ENST00000461326 SERPINA11Q86U17 422 aa4□□□□□ -1.77
CLK1-206ENST00000461326 CNTROBQ8N137 903 aa4□□□□□ -1.77
CLK1-206ENST00000461326 FRMD1Q8N878 549 aa4□□□□□ -1.77
CLK1-206ENST00000461326 TMEM116Q8NCL8 245 aa4□□□□□ -1.77
CLK1-206ENST00000461326 OR4N2Q8NGD1 307 aa4□□□□□ -1.77
CLK1-206ENST00000461326 BICD2Q8TD16 824 aa4□□□□□ -1.77
CLK1-206ENST00000461326 LBHD1Q9BQE6 289 aaPredicted RBP4□□□□□ -1.77
CLK1-206ENST00000461326 GHITMQ9H3K2 345 aa4□□□□□ -1.77
CLK1-206ENST00000461326 CXorf56Q9H5V9 222 aa4□□□□□ -1.77
CLK1-206ENST00000461326 SH2D4AQ9H788 454 aa4□□□□□ -1.77
CLK1-206ENST00000461326 ZNF304Q9HCX3 659 aa4□□□□□ -1.77
CLK1-206ENST00000461326 TMEM45AQ9NWC5 275 aa4□□□□□ -1.77
CLK1-206ENST00000461326 SEL1LQ9UBV2 794 aa4□□□□□ -1.77
CLK1-206ENST00000461326 UTYO14607 1347 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 TRBV5-3A0A0A0MS03 114 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 DYTNA2CJ06 578 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 TARSL2A2RTX5 802 aaKnown RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 INSIG1O15503 277 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 TGFB1I1O43294 461 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 UGDHO60701 494 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 IPO7O95373 1038 aaKnown RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 MT-CYBP00156 380 aaPredicted RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 CTSAP10619 480 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 CD72P21854 359 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 ATP5F1P24539 256 aaPredicted RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 CDAP32320 146 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 ICAM3P32942 547 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 PPARGP37231 505 aaPredicted RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 SLC18A2Q05940 514 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 TMEM115Q12893 351 aaPredicted RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 EPS8Q12929 822 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 CSTF3Q12996 717 aaKnown RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 SHBQ15464 509 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 FBXO43Q4G163 708 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 MIDNQ504T8 468 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 CPLX2Q6PUV4 134 aaKnown RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 ZNF782Q6ZMW2 699 aaPredicted RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 IKBIPQ70UQ0 350 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 TBC1D26Q86UD7 250 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 GPAT4Q86UL3 456 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 ARHGAP12Q8IWW6 846 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 SLC44A5Q8NCS7 719 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 KCNG4Q8TDN1 519 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 SGCDQ92629 289 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 RNF183Q96D59 192 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 FAM120BQ96EK7 910 aaKnown RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 ZNF419Q96HQ0 510 aaPredicted RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 ZFYVE19Q96K21 471 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 FBRSL1Q9HCM7 1045 aaKnown RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 SPAG4Q9NPE6 437 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 ASAH2Q9NR71 780 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 SEPT11Q9NVA2 429 aaKnown RBP3.99□□□□□ -1.77
CLK1-206ENST00000461326 KLHL13Q9P2N7 655 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 TBC1D29Q9UFV1 150 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 HAO1Q9UJM8 370 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 UTS2RQ9UKP6 389 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 TMEM5Q9Y2B1 443 aa3.99□□□□□ -1.77
CLK1-206ENST00000461326 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 MYO1GB0I1T2 1018 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 SCAMP1O15126 338 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 VILLO15195 856 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 TLX3O43711 291 aaPredicted RBP3.98□□□□□ -1.77
CLK1-206ENST00000461326 BCAR3O75815 825 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 TOP3BO95985 862 aaKnown RBP3.98□□□□□ -1.77
CLK1-206ENST00000461326 TFP02787 698 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 SNHG28P0DPA3 235 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 CTPS1P17812 591 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 EPHB2P29323 1055 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 TTKP33981 857 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 RYKP34925 604 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 GNAQP50148 359 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 EFNA5P52803 228 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 HDAC4P56524 1084 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 MC1RQ01726 317 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 NUCB1Q02818 461 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 CREB5Q02930 508 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 NIPAL4Q0D2K0 466 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 CHAF1BQ13112 559 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 OLIG2Q13516 323 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 RUNX2Q13950 521 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 PPP2R5BQ15173 497 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 TOMM20Q15388 145 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 PLEKHO1Q53GL0 409 aaPredicted RBP3.98□□□□□ -1.77
CLK1-206ENST00000461326 RILPL1Q5EBL4 403 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 ENTPD8Q5MY95 495 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 C6orf10Q5SRN2 563 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 PLEKHS1Q5SXH7 462 aa3.98□□□□□ -1.77
CLK1-206ENST00000461326 ZNF66Q6ZN08 573 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms