RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 NADKO95544 446 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 LDLRP01130 860 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 PRLP01236 227 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 IGHA1P01876 353 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 WNT1P04628 370 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 EDN1P05305 212 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 MMEP08473 750 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 CYP21A2P08686 494 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 FAHP16930 419 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 PAX3P23760 479 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 ITGB7P26010 798 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 LRPAP1P30533 357 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 THBS2P35442 1172 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 LIFRP42702 1097 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 GPR15P49685 360 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 HK2P52789 917 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 EFNA5P52803 228 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 PDE1AP54750 535 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 ADKP55263 362 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 CDH8P55286 799 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 NXPH1P58417 271 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 MYL7Q01449 175 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 GALEQ14376 348 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 TTC31Q49AM3 519 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 PITRM1Q5JRX3 1037 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 SDHAF4Q5VUM1 108 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 KIAA0895LQ68EN5 471 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 PAQR3Q6TCH7 311 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 SYNE3Q6ZMZ3 975 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 ESPNLQ6ZVH7 1005 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 TMC6Q7Z403 805 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 METTL23Q86XA0 190 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 CILP2Q8IUL8 1156 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 LYSMD2Q8IV50 215 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 MB21D2Q8IYB1 491 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 MCPH1Q8NEM0 835 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 OR4C6Q8NH72 309 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 PDCD6IPQ8WUM4 868 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 UCMAQ8WVF2 138 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 PEX11GQ96HA9 241 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 SENP8Q96LD8 212 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 CATSPER2Q96P56 530 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 FOXB1Q99853 325 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 C22orf23Q9BZE7 217 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 TRIM9Q9C026 710 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 CDT1Q9H211 546 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 LHX5Q9H2C1 402 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 USP29Q9HBJ7 922 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 SGK2Q9HBY8 427 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 PTPRHQ9HD43 1115 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 PRDM8Q9NQV8 689 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 SPHK2Q9NRA0 654 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 ANKEF1Q9NU02 776 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 RIC8BQ9NVN3 520 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 RGL1Q9NZL6 768 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 TRPM5Q9NZQ8 1165 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 ADAMTS6Q9UKP5 1117 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 TNFSF13BQ9Y275 285 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 GPR45Q9Y5Y3 372 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 TRPM6Q9BX84 2022 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 CACNA1CQ13936 2221 aa4.22□□□□□ -1.73
ECHDC1-211ENST00000460558 CYP3A7-CYP3A51PA0A087WV96 503 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 EFCAB7A8K855 629 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 NEDD8-MDP1E9PL57 170 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 TLR4O00206 839 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 ADAMTS3O15072 1205 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 EDIL3O43854 480 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 MAGEC1O60732 1142 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 SDC3O75056 442 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 TDP2O95551 362 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 MPIG6BO95866 241 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 IGHV4-34P06331 123 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 CENPBP07199 599 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 ALPPL2P10696 532 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 MCF2P10911 925 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 MBL2P11226 248 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 WT1P19544 449 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 CYP3A5P20815 502 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 C5AR1P21730 350 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 TGM2P21980 687 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 CYP3A7P24462 503 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 MCM5P33992 734 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 NAMPTP43490 491 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 PPP3CCP48454 512 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 HARS2P49590 506 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 RARRES1P49788 294 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 COPAP53621 1224 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 NLRP5P59047 1200 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 LILRA4P59901 499 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 SRSF2Q01130 221 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 TSPY1Q01534 308 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 DBPQ10586 325 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 EIF3IQ13347 325 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 ENPP2Q13822 863 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 CTTNQ14247 550 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 MYBPC3Q14896 1274 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 SLC9A5Q14940 896 aa4.21□□□□□ -1.74
ECHDC1-211ENST00000460558 SAFBQ15424 915 aaKnown RBP eCLIP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms