RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 GIPC3Q8TF64 312 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 ACE2Q9BYF1 805 aaPredicted RBP15.56■□□□□ 0.08
LMNB1-203ENST00000460265 GBA3Q9H227 469 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 SARS2Q9NP81 518 aaKnown RBP15.56■□□□□ 0.08
LMNB1-203ENST00000460265 STARD7Q9NQZ5 370 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 RRN3Q9NYV6 651 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 IGSF9Q9P2J2 1179 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 LZTS1Q9Y250 596 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 PAPPA2Q9BXP8 1791 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 HOXD8P13378 290 aaPredicted RBP15.56■□□□□ 0.08
LMNB1-203ENST00000460265 GRK2P25098 689 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 OR1E1P30953 314 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 CXCR3P49682 368 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 ACTR3P61158 418 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 RABGAP1LQ5R372 815 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 ZNF280DQ6N043 979 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 DHDDSQ86SQ9 333 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 C14orf80Q86SX3 495 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 SLC15A3Q8IY34 581 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 DEFB107AQ8IZN7 70 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 ZNF781Q8N8C0 355 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 PCSK9Q8NBP7 692 aaKnown RBP15.56■□□□□ 0.08
LMNB1-203ENST00000460265 ACVR1CQ8NER5 493 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 ZFP28Q8NHY6 868 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 SLC2A13Q96QE2 648 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 SLC9A7Q96T83 725 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 GMIPQ9P107 970 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 DNAJB4Q9UDY4 337 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 CDY1Q9Y6F8 540 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 FKBP6O75344 327 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 PGFP49763 221 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 ADAM17P78536 824 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 ART3Q13508 389 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 LPIN1Q14693 890 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 RBBP8Q99708 897 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 MLPHQ9BV36 600 aaPredicted RBP15.56■□□□□ 0.08
LMNB1-203ENST00000460265 KCNK13Q9HB14 408 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 NMUR1Q9HB89 426 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 SLC7A8Q9UHI5 535 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 APPL1Q9UKG1 709 aa15.56■□□□□ 0.08
LMNB1-203ENST00000460265 CRCPO75575 148 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 CHRNGP07510 517 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 HNRNPLP14866 589 aaKnown RBP eCLIP15.55■□□□□ 0.08
LMNB1-203ENST00000460265 CD68P34810 354 aaPredicted RBP15.55■□□□□ 0.08
LMNB1-203ENST00000460265 SOX11P35716 441 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 HALP42357 657 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 GEMP55040 296 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 OTUD1Q5VV17 481 aaPredicted RBP15.55■□□□□ 0.08
LMNB1-203ENST00000460265 LAYNQ6UX15 382 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 SERINC5Q86VE9 423 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 TMA16Q96EY4 203 aaKnown RBP15.55■□□□□ 0.08
LMNB1-203ENST00000460265 C7orf26Q96N11 449 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 SENP6Q9GZR1 1112 aaPredicted RBP15.55■□□□□ 0.08
LMNB1-203ENST00000460265 GLOD4Q9HC38 313 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 THEGQ9P2T0 379 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 PLA2G4CQ9UP65 541 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 MAGEC1O60732 1142 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 RAP1GDS1P52306 607 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 WNT3AP56704 352 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 GSTM4Q03013 218 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 FOLH1Q04609 750 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 DEFB128Q7Z7B8 93 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 NUP93Q8N1F7 819 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 CNTD1Q8N815 330 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 PRICKLE1Q96MT3 831 aaPredicted RBP15.55■□□□□ 0.08
LMNB1-203ENST00000460265 CCDC68Q9H2F9 335 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 PLAC1Q9HBJ0 212 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 FAIMQ9NVQ4 179 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 MARCH2Q9P0N8 246 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 TBC1D30Q9Y2I9 924 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 SHROOM3Q8TF72 1996 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 FAM95CA0A1B0GW59 222 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 NEMP2A6NFY4 417 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 KLHL2O95198 593 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 MPSTP25325 297 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 NFKBIAP25963 317 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 PEX2P28328 305 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 GRIA4P48058 902 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 NUDT2P50583 147 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 DUSP4Q13115 394 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 UGP2Q16851 508 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 FSCBQ5H9T9 825 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 RALGPS1Q5JS13 557 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 NEPROQ6NW34 567 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 TTC9BQ8N6N2 239 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 EFHBQ8N7U6 833 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 GABPB2Q8TAK5 448 aaPredicted RBP15.55■□□□□ 0.08
LMNB1-203ENST00000460265 IRGQQ8WZA9 623 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 HDAC11Q96DB2 347 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 VAT1Q99536 393 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 TRIM62Q9BVG3 475 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 COG4Q9H9E3 785 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 XPR1Q9UBH6 696 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 SUN2Q9UH99 717 aa15.55■□□□□ 0.08
LMNB1-203ENST00000460265 MAGEB16A2A368 324 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 E9PAM4 449 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 TGDSO95455 350 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 DHRS4L1P0CG22 281 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 PCSK6P29122 969 aa15.54■□□□□ 0.08
LMNB1-203ENST00000460265 ANO4Q32M45 955 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms