RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 PTAR1Q7Z6K3 402 aaPredicted RBP18.08■□□□□ 0.48
MSH6-207ENST00000456246 CXorf40AQ8TE69 158 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 SLC39A8Q9C0K1 460 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 THAP2Q9H0W7 228 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 CWC15Q9P013 229 aaKnown RBP18.08■□□□□ 0.48
MSH6-207ENST00000456246 LCMT1Q9UIC8 334 aa18.08■□□□□ 0.48
MSH6-207ENST00000456246 AKAP13Q12802 2813 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 A0A087X0T9 212 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 TSPAN11A1L157 253 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 IGLON5A6NGN9 336 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 J3KR12 359 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 RFPL3O75679 317 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 PALMO75781 387 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 CYP1A2P05177 515 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 FAM228BP0C875 321 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 CLDN2P57739 230 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 HNRNPKP61978 463 aaKnown RBP eCLIP18.07■□□□□ 0.48
MSH6-207ENST00000456246 IL10RBQ08334 325 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 SMAD1Q15797 465 aaKnown RBP18.07■□□□□ 0.48
MSH6-207ENST00000456246 BRAT1Q6PJG6 821 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 ARHGAP12Q8IWW6 846 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 ZCCHC14Q8WYQ9 949 aaKnown RBP18.07■□□□□ 0.48
MSH6-207ENST00000456246 EXOC2Q96KP1 924 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 BMFQ96LC9 184 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 ZNF599Q96NL3 588 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 NUP85Q9BW27 656 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 CINPQ9BW66 212 aaPredicted RBP18.07■□□□□ 0.48
MSH6-207ENST00000456246 XPO4Q9C0E2 1151 aaKnown RBP18.07■□□□□ 0.48
MSH6-207ENST00000456246 ATP13A3Q9H7F0 1226 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.07■□□□□ 0.48
MSH6-207ENST00000456246 ANAPC7Q9UJX3 599 aa18.07■□□□□ 0.48
MSH6-207ENST00000456246 ARID1BQ8NFD5 2236 aaPredicted RBP18.07■□□□□ 0.48
MSH6-207ENST00000456246 PTPRBP23467 1997 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 POM121BA6NF01 834 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 H3BM21 787 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 MYO1FO00160 1098 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 DFFAO00273 331 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 SPINT1O43278 529 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 TM7SF2O76062 418 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 ALPPL2P10696 532 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 IL1R2P27930 398 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 CASP14P31944 242 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 SERPINB6P35237 376 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 RENBPP51606 427 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 NSUN2Q08J23 767 aaKnown RBP eCLIP18.06■□□□□ 0.48
MSH6-207ENST00000456246 ZNF211Q13398 564 aaPredicted RBP18.06■□□□□ 0.48
MSH6-207ENST00000456246 CCDC122Q5T0U0 273 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 SPECC1LQ69YQ0 1117 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 ERAP2Q6P179 960 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 TMCO3Q6UWJ1 677 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 PARGQ86W56 976 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 TMPRSS12Q86WS5 348 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 SLC22A18ASQ8N1D0 253 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 TSC1Q92574 1164 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 KLF6Q99612 283 aaPredicted RBP18.06■□□□□ 0.48
MSH6-207ENST00000456246 SUV39H2Q9H5I1 410 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 RCOR3Q9P2K3 495 aaPredicted RBP18.06■□□□□ 0.48
MSH6-207ENST00000456246 IPO11Q9UI26 975 aaKnown RBP18.06■□□□□ 0.48
MSH6-207ENST00000456246 ZMIZ1Q9ULJ6 1067 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 ITM2BQ9Y287 266 aa18.06■□□□□ 0.48
MSH6-207ENST00000456246 SPTY2D1-AS1A0A0U1RR47 76 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 NEMP2A6NFY4 417 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 RIOK3O14730 519 aaKnown RBP18.05■□□□□ 0.48
MSH6-207ENST00000456246 RAD51BO15315 384 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 PIAS2O75928 621 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 PIGNO95427 931 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 TPM1P09493 284 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 TIMP2P16035 220 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 CKMT2P17540 419 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 DGKAP23743 735 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 SERPINA4P29622 427 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 HSPA9P38646 679 aaKnown RBP18.05■□□□□ 0.48
MSH6-207ENST00000456246 ACADVLP49748 655 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 PTK2BQ14289 1009 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 HADHQ16836 314 aaKnown RBP18.05■□□□□ 0.48
MSH6-207ENST00000456246 UGP2Q16851 508 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 SMTNL2Q2TAL5 461 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 POLNQ7Z5Q5 900 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 NPWQ8N729 165 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 OR4C6Q8NH72 309 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 HSPH1Q92598 858 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 PSKH2Q96QS6 385 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 DUSP23Q9BVJ7 150 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 EVA1BQ9NVM1 165 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 UVRAGQ9P2Y5 699 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 SEPT3Q9UH03 358 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 GGT7Q9UJ14 662 aa18.05■□□□□ 0.48
MSH6-207ENST00000456246 KNTC1P50748 2209 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 SPEGQ15772 3267 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 INSIG1O15503 277 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 SDC3O75056 442 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 RARAP10276 462 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 NME1P15531 152 aaKnown RBP18.04■□□□□ 0.48
MSH6-207ENST00000456246 HNF1BP35680 557 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 PFN3P60673 137 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 AP1S1P61966 158 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 YPEL5P62699 121 aa18.04■□□□□ 0.48
MSH6-207ENST00000456246 SLC25A11Q02978 314 aaKnown RBP18.04■□□□□ 0.48
MSH6-207ENST00000456246 TSR1Q2NL82 804 aaKnown RBP18.04■□□□□ 0.48
MSH6-207ENST00000456246 PROX2Q3B8N5 592 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms