RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 NUAK1O60285 661 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 EEF1DP29692 281 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 ZNF143P52747 638 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 KCNJ11Q14654 390 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 SUZ12Q15022 739 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 PCSK7Q16549 785 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 VWA5B1Q5TIE3 1220 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 UBE2UQ5VVX9 321 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 CDR2LQ86X02 465 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 TFAP2BQ92481 460 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 USP13Q92995 863 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 VRTNQ9H8Y1 702 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 M0QX08 132 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 GCATO75600 419 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 ZNF286BP0CG31 522 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 MLNP12872 115 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 PDGFRAP16234 1089 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 TGM1P22735 817 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 SSTR3P32745 418 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 GRIA3P42263 894 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 OCA2Q04671 838 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 MAPRE1Q15691 268 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 NEDD8Q15843 81 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 FASTKD1Q53R41 847 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 SPRYD7Q5W111 196 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 SCYL2Q6P3W7 929 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 RALGPS2Q86X27 583 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 C1orf127Q8N9H9 656 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 TNIP2Q8NFZ5 429 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 ZSCAN18Q8TBC5 510 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 ACSF2Q96CM8 615 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 CIB1Q99828 191 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 HMG20AQ9NP66 347 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 A0A087WZ62 844 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 ZNF487B1APH4 448 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 M0QYV0 167 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 CCRL2O00421 344 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 ALX3O95076 343 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 HSPA4LO95757 839 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 IGHA2P01877 340 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 CXCL8P10145 99 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 DUSP28Q4G0W2 176 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 NPLOC4Q8TAT6 608 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 ATP6V1E2Q96A05 226 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 SH3YL1Q96HL8 342 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 RNF157Q96PX1 679 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 EBNA1BP2Q99848 306 aaKnown RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 FDXACB1Q9BRP7 624 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 MTG1Q9BT17 334 aaPredicted RBP13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 SDCBP2Q9H190 292 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 CITO14578 2027 aa13.59□□□□□ -0.23
SYNGAP1-204ENST00000449372 SYCE1LA8MT33 242 aa13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 INO80B-WBP1J3KQ70 363 aa13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 RALGDSQ12967 914 aa13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 TRIM71Q2Q1W2 868 aaKnown RBP13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 HEATR6Q6AI08 1181 aaKnown RBP13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 FAM117BQ6P1L5 589 aa13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 SCARA5Q6ZMJ2 495 aa13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 ILDR2Q71H61 639 aa13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 KYQ8NBH2 561 aa13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 PDPRQ8NCN5 879 aa13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 LRTOMTQ8WZ04 291 aa13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 EFHD1Q9BUP0 239 aa13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 NEK6Q9HC98 313 aa13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 CCDC177Q9NQR7 707 aaPredicted RBP13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 PCDHA11Q9Y5I1 949 aa13.58□□□□□ -0.23
SYNGAP1-204ENST00000449372 SLCO1B7G3V0H7 640 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 MMP3P08254 477 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 NFICP08651 508 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 TCN1P20061 433 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 SLC1A6P48664 564 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 COPZ1P61923 177 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 YWHAZP63104 245 aaKnown RBP13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 KLF10Q13118 480 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 PIGGQ5H8A4 983 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 TJAP1Q5JTD0 557 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 TEDDM1Q5T9Z0 273 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 DSELQ8IZU8 1212 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 LENG8Q96PV6 779 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 DNMT3BQ9UBC3 853 aaKnown RBP13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 ADAM28Q9UKQ2 775 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 SNX13Q9Y5W8 968 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 TRIP11Q15643 1979 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 HOXC11O43248 304 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 ARF4P18085 180 aaPredicted RBP13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 ME2P23368 584 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 GNG2P59768 71 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 FAM110CQ1W6H9 321 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 KCNT1Q5JUK3 1230 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 PPP4R4Q6NUP7 873 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 KCTD8Q6ZWB6 473 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 FEM1CQ96JP0 617 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 SLC4A5Q9BY07 1137 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 FAM172BPA6NC97 362 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 LACTBL1A8MY62 500 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 HACD1B0YJ81 288 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 AP3B1O00203 1094 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 SLC22A2O15244 555 aa13.58□□□□□ -0.24
SYNGAP1-204ENST00000449372 ASNA1O43681 348 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms