RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ALOX15BO15296 676 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 BNIP3LO60238 219 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 RNF40O75150 1001 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 SOCS5O75159 536 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 SIN3BO75182 1162 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 CHRNB1P11230 501 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 TRAF2Q12933 501 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 SPARCL1Q14515 664 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 PCSK7Q16549 785 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 HSF5Q4G112 596 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-203ENST00000449049 C2orf27AQ580R0 203 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 NAPEPLDQ6IQ20 393 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 RANBP10Q6VN20 620 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 SIX5Q8N196 739 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 LRIG1Q96JA1 1093 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 TRIB3Q96RU7 358 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 TBL1YQ9BQ87 522 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 FSD1LQ9BXM9 530 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 FRMD8Q9BZ67 464 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-203ENST00000449049 ATP13A3Q9H7F0 1226 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 LTB4R2Q9NPC1 389 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 NFU1Q9UMS0 254 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 ARIH1Q9Y4X5 557 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-203ENST00000449049 RAI2Q9Y5P3 530 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 WASF2Q9Y6W5 498 aa14.2□□□□□ -0.14
SHMT2-203ENST00000449049 MYO18AQ92614 2054 aaKnown RBP14.19□□□□□ -0.14
SHMT2-203ENST00000449049 TRAFD1O14545 582 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-203ENST00000449049 HTRA2O43464 458 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-203ENST00000449049 FZD6O60353 706 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 EPOP01588 193 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 EPHX1P07099 455 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 MYBL2P10244 700 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 CA4P22748 312 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 TARSP26639 723 aaKnown RBP14.19□□□□□ -0.14
SHMT2-203ENST00000449049 SERPINA4P29622 427 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 GKP32189 559 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 CDK18Q07002 472 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 BCL2L1Q07817 233 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 OLIG2Q13516 323 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 HLTFQ14527 1009 aaKnown RBP eCLIP14.19□□□□□ -0.14
SHMT2-203ENST00000449049 ELAVL3Q14576 367 aaKnown RBP14.19□□□□□ -0.14
SHMT2-203ENST00000449049 PPP1R21Q6ZMI0 780 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 CCNI2Q6ZMN8 369 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-203ENST00000449049 LINC00523Q86TU6 105 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.19□□□□□ -0.14
SHMT2-203ENST00000449049 SYNPOQ8N3V7 929 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 ZCCHC9Q8N567 271 aaKnown RBP14.19□□□□□ -0.14
SHMT2-203ENST00000449049 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.19□□□□□ -0.14
SHMT2-203ENST00000449049 SERPINB12Q96P63 405 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 NECAB3Q96P71 396 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-203ENST00000449049 FICDQ9BVA6 458 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 ZDHHC6Q9H6R6 413 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 CASS4Q9NQ75 786 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 PRSS16Q9NQE7 514 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 IL36AQ9UHA7 158 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 PCDHGC4Q9Y5F7 938 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 ANKRD36A6QL64 1941 aa14.19□□□□□ -0.14
SHMT2-203ENST00000449049 GOLGA8MH3BSY2 632 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 ADAM23O75077 832 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 PPFIA2O75334 1257 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 PIGNO95427 931 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 KLF8O95600 359 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-203ENST00000449049 AGTP01019 485 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 PRLP01236 227 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 CTSLP07711 333 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 MLNP12872 115 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 GRIA1P42261 906 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 MAGEA3P43357 314 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 SARNPP82979 210 aaKnown RBP14.18□□□□□ -0.14
SHMT2-203ENST00000449049 ZXDAP98168 799 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 CBLBQ13191 982 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 CAMK2GQ13555 558 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-203ENST00000449049 LRRC32Q14392 662 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 SDE2Q6IQ49 451 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 LRRC8BQ6P9F7 803 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 CAND1Q86VP6 1230 aaKnown RBP14.18□□□□□ -0.14
SHMT2-203ENST00000449049 CAMK1DQ8IU85 385 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 STK40Q8N2I9 435 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 OR8D1Q8WZ84 308 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 ECHDC3Q96DC8 303 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 IFT43Q96FT9 208 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 ZNF641Q96N77 438 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-203ENST00000449049 NELL2Q99435 816 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 OSBPL1AQ9BXW6 950 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 FOXP3Q9BZS1 431 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 ARNT2Q9HBZ2 717 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 XAB2Q9HCS7 855 aaKnown RBP14.18□□□□□ -0.14
SHMT2-203ENST00000449049 CKAP5Q14008 2032 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 USP12O75317 370 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 ATXN1LP0C7T5 689 aaKnown RBP14.18□□□□□ -0.14
SHMT2-203ENST00000449049 WASP42768 502 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 FZD5Q13467 585 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 SLC1A5Q15758 541 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 DENND5AQ6IQ26 1287 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 TXNDC5Q8NBS9 432 aaKnown RBP14.18□□□□□ -0.14
SHMT2-203ENST00000449049 SPOCK2Q92563 424 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 FAM129BQ96TA1 746 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 PHACTR1Q9C0D0 580 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 SUV39H2Q9H5I1 410 aa14.18□□□□□ -0.14
SHMT2-203ENST00000449049 MTRF1LQ9UGC7 380 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms