RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ANKRD13BQ86YJ7 626 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 ADGRF4Q8IZF3 695 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 PRSS3P2Q8NHM4 247 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 AFAP1L1Q8TED9 768 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 RUFY2Q8WXA3 655 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 RPL36ALQ969Q0 106 aaKnown RBP4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 EME1Q96AY2 570 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 SAAL1Q96ER3 474 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 PERPQ96FX8 193 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 FRG2BQ96QU4 278 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 PIP5K1AQ99755 562 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 CLSTN3Q9BQT9 956 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 TMEM79Q9BSE2 394 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 TUBB6Q9BUF5 446 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 MAK16Q9BXY0 300 aaKnown RBP4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 EDEM3Q9BZQ6 932 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 CTDSP1Q9GZU7 261 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 ZNF304Q9HCX3 659 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 THSD1Q9NS62 852 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 CWC25Q9NXE8 425 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 MSRB1Q9NZV6 116 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 HCN3Q9P1Z3 774 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 LIMA1Q9UHB6 759 aaKnown RBP4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 OSGIN2Q9Y236 505 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 SNX5Q9Y5X3 404 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 KCNE2Q9Y6J6 123 aa4.7□□□□□ -1.66
HMGB1P48-201ENST00000446155 LY6G6EA0A0G2JKS1 128 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 LIPT2A6NK58 231 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 RHODO00212 210 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 PRPF4O43172 522 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 MSI1O43347 362 aaKnown RBP4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 HLA-DQA2P01906 255 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 ICAM3P32942 547 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 ABCD1P33897 745 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 GARSP41250 739 aaKnown RBP4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 TNNT3P45378 269 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 ARHGAP8P85298 464 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 GALNT3Q14435 633 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 NAA25Q14CX7 972 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 MED22Q15528 200 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 SMTNL2Q2TAL5 461 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 BMP2KLQ5H9B9 411 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 C1orf141Q5JVX7 400 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 SH2D4BQ5SQS7 431 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 PLEKHS1Q5SXH7 462 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 CYB5R4Q7L1T6 521 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 FRMD1Q8N878 549 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 SLC44A5Q8NCS7 719 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 TNIP2Q8NFZ5 429 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 HDAC7Q8WUI4 952 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 JAKMIP1Q96N16 626 aaKnown RBP4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 EYA3Q99504 573 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 SPRTNQ9H040 489 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 SMARCAD1Q9H4L7 1026 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 RABEP2Q9H5N1 569 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 GRPEL1Q9HAV7 217 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 PDE7BQ9NP56 450 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 ABCF3Q9NUQ8 709 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 TRNAU1APQ9NX07 287 aaKnown RBP4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 HEY2Q9UBP5 337 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 PCDHA12Q9UN75 941 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 SLC8A2Q9UPR5 921 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 RB1CC1Q8TDY2 1594 aa4.69□□□□□ -1.66
HMGB1P48-201ENST00000446155 TRBV5-7A0A0A0MS05 114 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 A0A1W2PQ09 198 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 TMEM247A6NEH6 219 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 SMTNL1A8MU46 457 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 CCNT1O60563 726 aaKnown RBP4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 MOSPD3O75425 235 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 SEC14L2O76054 403 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 DDAH2O95865 285 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 FGBP02675 491 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 URODP06132 367 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 CYP19A1P11511 503 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 FCGR2AP12318 317 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 PRF1P14222 555 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 HNF1BP35680 557 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 EIF3BP55884 814 aaKnown RBP4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 UFM1P61960 85 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 RBMS2Q15434 407 aaKnown RBP4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 ETFDHQ16134 617 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 AP5B1Q2VPB7 878 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 C5orf22Q49AR2 442 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 FAM171A1Q5VUB5 890 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 LRCH2Q5VUJ6 765 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 TBC1D9BQ66K14 1250 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 NAPEPLDQ6IQ20 393 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 ZNF425Q6IV72 752 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 NCEH1Q6PIU2 408 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 SHC4Q6S5L8 630 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 DNAJB7Q7Z6W7 309 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 MON1AQ86VX9 555 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 SCML4Q8N228 414 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 SCAIQ8N9R8 606 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 AVL9Q8NBF6 648 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 SETD9Q8NE22 299 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 MPLKIPQ8TAP9 179 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 DENND1AQ8TEH3 1009 aa4.68□□□□□ -1.66
HMGB1P48-201ENST00000446155 NOC3LQ8WTT2 800 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms