RNA–Protein interactions for RNA: ENST00000445853.5

FLOT1-206, Transcript of flotillin 1, humanhuman

TSL 1 (best)

Gene FLOT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-206ENST00000445853 LHX3Q9UBR4 397 aa12.09□□□□□ -0.47
FLOT1-206ENST00000445853 CDV3Q9UKY7 258 aaKnown RBP12.09□□□□□ -0.47
FLOT1-206ENST00000445853 RPL26L1Q9UNX3 145 aaKnown RBP12.09□□□□□ -0.47
FLOT1-206ENST00000445853 FADS3Q9Y5Q0 445 aa12.09□□□□□ -0.47
FLOT1-206ENST00000445853 HS3ST3A1Q9Y663 406 aa12.09□□□□□ -0.47
FLOT1-206ENST00000445853 MUC22E2RYF6 1773 aaPredicted RBP12.09□□□□□ -0.47
FLOT1-206ENST00000445853 USP34Q70CQ2 3546 aa12.09□□□□□ -0.47
FLOT1-206ENST00000445853 DMDP11532 3685 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 GOLGA6L9A6NEM1 432 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 FAM47DPA6NHR8 397 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 RIOK3O14730 519 aaKnown RBP12.08□□□□□ -0.48
FLOT1-206ENST00000445853 INSIG1O15503 277 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 MFSD11O43934 449 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 PCDH8O95206 1070 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 CER1O95813 267 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 PEX11BO96011 259 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 CFIP05156 583 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 UGT2B4P06133 528 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 IGHV4-34P06331 123 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 CR2P20023 1033 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 SCNN1BP51168 640 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 C21orf59P57076 290 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
FLOT1-206ENST00000445853 MMRN1Q13201 1228 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 STAT4Q14765 748 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 SUZ12Q15022 739 aaKnown RBP12.08□□□□□ -0.48
FLOT1-206ENST00000445853 UGP2Q16851 508 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 ADAT2Q7Z6V5 191 aaKnown RBP12.08□□□□□ -0.48
FLOT1-206ENST00000445853 CCDC50Q8IVM0 306 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 DCLK2Q8N568 766 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 TSEN2Q8NCE0 465 aaKnown RBP12.08□□□□□ -0.48
FLOT1-206ENST00000445853 ACRBPQ8NEB7 543 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 TRIM58Q8NG06 486 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 C1orf216Q8TAB5 229 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 ECHDC3Q96DC8 303 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 FRMD8P1Q9BZ68 369 aaPredicted RBP12.08□□□□□ -0.48
FLOT1-206ENST00000445853 MIR1-1HGQ9H1L0 117 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 ERVMER34-1Q9H9K5 563 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 SCUBE2Q9NQ36 999 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 SERGEFQ9UGK8 458 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 EIF2B4Q9UI10 523 aaKnown RBP12.08□□□□□ -0.48
FLOT1-206ENST00000445853 DOCK4Q8N1I0 1966 aa12.08□□□□□ -0.48
FLOT1-206ENST00000445853 ATG2BQ96BY7 2078 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 GVINP1Q7Z2Y8 2422 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 LNP1A1A4G5 178 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 MACROD2A1Z1Q3 448 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 GRID2IPA4D2P6 1211 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 RCCD1A6NED2 376 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 APOC4-APOC2K7ER74 178 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 SLC30A4O14863 429 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 AREL1O15033 823 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 ZSCAN12O43309 604 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 HTRA2O43464 458 aaPredicted RBP12.07□□□□□ -0.48
FLOT1-206ENST00000445853 CST8O60676 142 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 APOC2P02655 101 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 PTMAP06454 111 aaKnown RBP12.07□□□□□ -0.48
FLOT1-206ENST00000445853 HNRNPA2B1P22626 353 aaKnown RBP12.07□□□□□ -0.48
FLOT1-206ENST00000445853 CD38P28907 300 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 PEX5P50542 639 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 IRX4P78413 519 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 GBE1Q04446 702 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 SLC10A7Q0GE19 358 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 ATXN7L2Q5T6C5 722 aaPredicted RBP12.07□□□□□ -0.48
FLOT1-206ENST00000445853 CCDC181Q5TID7 509 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 BBS12Q6ZW61 710 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 ARMCX6Q7L4S7 300 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 NT5DC3Q86UY8 548 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 PAF1Q8N7H5 531 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 CXorf40AQ8TE69 158 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 TFB1MQ8WVM0 346 aaKnown RBP12.07□□□□□ -0.48
FLOT1-206ENST00000445853 SNX19Q92543 992 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 ARRDC3Q96B67 414 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 RNF25Q96BH1 459 aaPredicted RBP12.07□□□□□ -0.48
FLOT1-206ENST00000445853 ERLEC1Q96DZ1 483 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 IFT43Q96FT9 208 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 SERAC1Q96JX3 654 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 KLHL32Q96NJ5 620 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 OLFM3Q96PB7 478 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 EDEM2Q9BV94 578 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 C1QTNF2Q9BXJ5 285 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 PARD6AQ9NPB6 346 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 TMEM74BQ9NUR3 256 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 DNAAF2Q9NVR5 837 aaKnown RBP12.07□□□□□ -0.48
FLOT1-206ENST00000445853 RBM22Q9NW64 420 aaKnown RBP eCLIP12.07□□□□□ -0.486e-8■■■■■ 33.4
FLOT1-206ENST00000445853 DLL3Q9NYJ7 618 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 SALL4Q9UJQ4 1053 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 TRHDEQ9UKU6 1024 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 PHTF1Q9UMS5 762 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 PCDHGB2Q9Y5G2 931 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 HEY1Q9Y5J3 304 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 DUSP10Q9Y6W6 482 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 PLXND1Q9Y4D7 1925 aa12.07□□□□□ -0.48
FLOT1-206ENST00000445853 hCG_1818297A0A087WSY0 165 aa12.06□□□□□ -0.48
FLOT1-206ENST00000445853 A0A1W2PQU0 124 aa12.06□□□□□ -0.48
FLOT1-206ENST00000445853 ENGP17813 658 aa12.06□□□□□ -0.48
FLOT1-206ENST00000445853 TNNT3P45378 269 aaPredicted RBP12.06□□□□□ -0.48
FLOT1-206ENST00000445853 ARRB1P49407 418 aaPredicted RBP12.06□□□□□ -0.48
FLOT1-206ENST00000445853 NUMBP49757 651 aa12.06□□□□□ -0.48
FLOT1-206ENST00000445853 TAS2R38P59533 333 aa12.06□□□□□ -0.48
FLOT1-206ENST00000445853 AGERQ15109 404 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms