RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PGLYRP2Q96PD5 576 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 ADAM2Q99965 735 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 LEF1Q9UJU2 399 aaPredicted RBP16.77■□□□□ 0.28
TCOF1-206ENST00000445265 AZIN1O14977 448 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 HOXA2O43364 376 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 IPO13O94829 963 aaKnown RBP16.77■□□□□ 0.28
TCOF1-206ENST00000445265 VAV1P15498 845 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 CCNCP24863 283 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 CDC16Q13042 620 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 UBR7Q8N806 425 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 PPP1R13LQ8WUF5 828 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 DCUN1D5Q9BTE7 237 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 TEX12Q9BXU0 123 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 NFKBIZQ9BYH8 718 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 PARVBQ9HBI1 364 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 FAM105AQ9NUU6 356 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 ETAA1Q9NY74 926 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 DDX60Q8IY21 1712 aaKnown RBP16.77■□□□□ 0.28
TCOF1-206ENST00000445265 ATP6AP2A0A1C7CYW4 349 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 BBIP1A8MTZ0 92 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 ATP6AP2O75787 350 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 MLYCDO95822 493 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 BCL10O95999 233 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 FGFR1P11362 822 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 HGFP14210 728 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 MSH3P20585 1137 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 TRPC1P48995 793 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 ALDH7A1P49419 539 aaKnown RBP16.77■□□□□ 0.28
TCOF1-206ENST00000445265 CCNHP51946 323 aaPredicted RBP16.77■□□□□ 0.28
TCOF1-206ENST00000445265 SLC7A2P52569 658 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 LILRA4P59901 499 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 OLFML1Q6UWY5 402 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 MOB2Q70IA6 237 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 STK40Q8N2I9 435 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 IRGQQ8WZA9 623 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 HDAC10Q969S8 669 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 NXNL1Q96CM4 212 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 MINDY3Q9H8M7 445 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 TMCO1Q9UM00 188 aa16.77■□□□□ 0.28
TCOF1-206ENST00000445265 INCA1Q0VD86 236 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 TARBP2Q15633 366 aaKnown RBP16.77■□□□□ 0.27
TCOF1-206ENST00000445265 LSM12Q3MHD2 195 aaKnown RBP16.77■□□□□ 0.27
TCOF1-206ENST00000445265 MAP1SQ66K74 1059 aaPredicted RBP16.77■□□□□ 0.27
TCOF1-206ENST00000445265 OTOP3Q7RTS5 596 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 ZDHHC13Q8IUH4 622 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 ITFG1Q8TB96 612 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 SOCS4Q8WXH5 440 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 FIG4Q92562 907 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 SEMA3CQ99985 751 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 HERPUD2Q9BSE4 406 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 ELOVL6Q9H5J4 265 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 SIX4Q9UIU6 781 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 ZNF112Q9UJU3 913 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 AP3M1Q9Y2T2 418 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 AK5Q9Y6K8 562 aa16.77■□□□□ 0.27
TCOF1-206ENST00000445265 SLC22A2O15244 555 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 PAGE1O75459 146 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 VAC14Q08AM6 782 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 C16orf72Q14CZ0 275 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 TIFABQ6ZNK6 161 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 CASP10Q92851 521 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 C1orf21Q9H246 121 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 ST3GAL5Q9UNP4 418 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 LRIG2O94898 1065 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 MYCP01106 439 aaPredicted RBP16.76■□□□□ 0.27
TCOF1-206ENST00000445265 ALDH2P05091 517 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 DLDP09622 509 aaKnown RBP16.76■□□□□ 0.27
TCOF1-206ENST00000445265 PEX2P28328 305 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 MSX2P35548 267 aaPredicted RBP16.76■□□□□ 0.27
TCOF1-206ENST00000445265 GRIA1P42261 906 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 KRT33BQ14525 404 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 MILR1Q7Z6M3 343 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 AMIGO2Q86SJ2 522 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 CLEC4CQ8WTT0 213 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 TMEM174Q8WUU8 243 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 XYLT2Q9H1B5 865 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 NMRK2Q9NPI5 230 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 MARF1Q9Y4F3 1742 aaKnown RBP16.76■□□□□ 0.27
TCOF1-206ENST00000445265 DHRS12A0PJE2 317 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 CCNT2O60583 730 aaKnown RBP16.76■□□□□ 0.27
TCOF1-206ENST00000445265 CCT8P50990 548 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 ATP6V0D1P61421 351 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 NCBP2-AS2Q69YL0 99 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 OR52K2Q8NGK3 314 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 ACTRT2Q8TDY3 377 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 EPS8L2Q9H6S3 715 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 C5orf58C9J3I9 102 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 TK2O00142 265 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 AOC1P19801 751 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 ADARP55265 1226 aaKnown RBP16.76■□□□□ 0.27
TCOF1-206ENST00000445265 EPS8Q12929 822 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 CSTF3Q12996 717 aaKnown RBP16.76■□□□□ 0.27
TCOF1-206ENST00000445265 NEDD8Q15843 81 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 SOWAHAQ2M3V2 549 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 SPRED3Q2MJR0 410 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 CROCCP3Q8IVE0 287 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 EID3Q8N140 333 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 CRYBG2Q8N1P7 616 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 CARNMT1Q8N4J0 409 aa16.76■□□□□ 0.27
TCOF1-206ENST00000445265 HOPXQ9BPY8 73 aaPredicted RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms