RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 RNF145Q96MT1 663 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 WRAP73Q9P2S5 460 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 CNTN2Q02246 1040 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 SPCS2Q15005 226 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 PQLC3Q8N755 202 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 Q8N9G6 341 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 SNX18Q96RF0 628 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 FIZ1Q96SL8 496 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CAB39LQ9H9S4 337 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ARMC1Q9NVT9 282 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ACOT8O14734 319 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CAPNS1P04632 268 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CLK3P49761 638 aaKnown RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 PPP2R2BQ00005 443 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 PCLAFQ15004 111 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CYS1Q717R9 158 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 TRPV3Q8NET8 790 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 SLC7A3Q8WY07 619 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ELMO2Q96JJ3 720 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ZNF641Q96N77 438 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 TOR3AQ9H497 397 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 FBXO28Q9NVF7 368 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 AQP12BA6NM10 295 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 PLSCR1O15162 318 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 INMTO95050 263 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ZNF132P52740 706 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 NOMO1Q15155 1222 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 AQP12AQ8IXF9 295 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 NCLNQ969V3 563 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 KLHL32Q96NJ5 620 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CITED4Q96RK1 184 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 RPAP3Q9H6T3 665 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 MED1Q15648 1581 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 URB1O60287 2271 aaKnown RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 ZNF195O14628 629 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ERBB2P04626 1255 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 EFNA5P52803 228 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 SF3B4Q15427 424 aaKnown RBP eCLIP5.06□□□□□ -1.68e-7■■■■□ 25.1
HERC1-201ENST00000443617 ZACNQ401N2 412 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CCDC58Q4VC31 144 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 HACD2Q6Y1H2 254 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 UTS2BQ765I0 119 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ZDHHC13Q8IUH4 622 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 GRPEL2Q8TAA5 225 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 RPF1Q9H9Y2 349 aaKnown RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 SFMBT1Q9UHJ3 866 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 PCDHA10Q9Y5I2 948 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 LOC100506127A0A0U1RQW1 187 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ICMTO60725 284 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 THRBP10828 461 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ALDH4A1P30038 563 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 DGCR6Q14129 220 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ZNF181Q2M3W8 571 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 LINC00523Q86TU6 105 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 HACE1Q8IYU2 909 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ZHX1-C8orf76Q96EF9 292 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 SLC45A3Q96JT2 553 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 DMRTB1Q96MA1 342 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 SCN3BQ9NY72 215 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 RABL2BQ9UNT1 228 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 RAD54BQ9Y620 910 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ALPK2Q86TB3 2170 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 DLX3O60479 287 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ABCB7O75027 752 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 RBP1P09455 135 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 INTS11Q5TA45 600 aaKnown RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 CLIP4Q8N3C7 705 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 GAD1Q99259 594 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CCDC177Q9NQR7 707 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 NRBP2Q9NSY0 501 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ADPRHL2Q9NX46 363 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.06□□□□□ -1.6
HERC1-201ENST00000443617 PDE10AQ9Y233 779 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 PSAT1Q9Y617 370 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 ZSCAN5BA6NJL1 495 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 NOS1APO75052 506 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 USP12O75317 370 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 CDH1P12830 882 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 LDHDQ86WU2 507 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 C4orf19Q8IY42 314 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 SCML4Q8N228 414 aa5.06□□□□□ -1.6
HERC1-201ENST00000443617 HOPXQ9BPY8 73 aaPredicted RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 MRPL4Q9BYD3 311 aaKnown RBP5.06□□□□□ -1.6
HERC1-201ENST00000443617 MED26O95402 600 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 MT-CO1P00395 513 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 POLD2P49005 469 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 TNK2Q07912 1038 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 EMC2Q15006 297 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 TAZQ16635 292 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 SLC36A3Q495N2 470 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 TJAP1Q5JTD0 557 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ZBTB41Q5SVQ8 909 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ZCCHC8Q6NZY4 707 aaKnown RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 MFSD2AQ8NA29 543 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 RNF157Q96PX1 679 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 JPH1Q9HDC5 661 aaPredicted RBP5.05□□□□□ -1.6
HERC1-201ENST00000443617 CORINQ9Y5Q5 1042 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 SIGLEC1Q9BZZ2 1709 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 LAMA4Q16363 1823 aa5.05□□□□□ -1.6
HERC1-201ENST00000443617 ZNF99A8MXY4 864 aaPredicted RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms