RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 FITM2Q8N6M3 262 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 C1orf127Q8N9H9 656 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 UBE2E3Q969T4 207 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 RHOBTB2Q9BYZ6 727 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 SEMA6AQ9H2E6 1030 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 TBC1D30Q9Y2I9 924 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 C2CD4BA6NLJ0 364 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 MSCO60682 206 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 SMNDC1O75940 238 aaKnown RBP eCLIP12.99□□□□□ -0.33
BRPF3-203ENST00000441123 CST3P01034 146 aaPredicted RBP12.99□□□□□ -0.33
BRPF3-203ENST00000441123 SCNN1AP37088 669 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 BROXQ5VW32 411 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 LUZP2Q86TE4 346 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 BANPQ8N9N5 519 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 RCN3Q96D15 328 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 ZC4H2Q9NQZ6 224 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 SLC12A4Q9UP95 1085 aa12.99□□□□□ -0.33
BRPF3-203ENST00000441123 PRR5-ARHGAP8B1AHC4 643 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 LIMK2P53671 638 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 ARHGAP8P85298 464 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 OTUD3Q5T2D3 398 aaPredicted RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 RAP1GAP2Q684P5 730 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 MON1AQ86VX9 555 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 QRFPRQ96P65 431 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 ATAD3AQ9NVI7 634 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 KLHL28Q9NXS3 571 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 LYPLA1O75608 230 aaPredicted RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 KRT75O95678 551 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 PABPC1P11940 636 aaKnown RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 PSMB9P28065 219 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 CDK18Q07002 472 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 TREML2Q5T2D2 321 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 INTS11Q5TA45 600 aaKnown RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 CNTD1Q8N815 330 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 MECRQ9BV79 373 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 PNPOQ9NVS9 261 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 RAB26Q9ULW5 256 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 PADI4Q9UM07 663 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 VWA7Q9Y334 891 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 TSPAN1O60635 241 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 TSPAN3O60637 253 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 SLURP2P0DP57 97 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 GRIA3P42263 894 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 FOLH1Q04609 750 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 SHROOM1Q2M3G4 852 aaPredicted RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 RFX4Q33E94 735 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 PARP15Q460N3 678 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 ARHGAP17Q68EM7 881 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 KRT73Q86Y46 540 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 SYT12Q8IV01 421 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 OR4L1Q8NH43 312 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 GRIP2Q9C0E4 1043 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 ARMC7Q9H6L4 198 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 STMN3Q9NZ72 180 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 SPG21Q9NZD8 308 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 SATB2Q9UPW6 733 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 GRIN2DO15399 1336 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 ADSSP30520 456 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 C21orf59P57076 290 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 ROR2Q01974 943 aaKnown RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 KLF10Q13118 480 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 TSNQ15631 228 aaKnown RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 NOMO2Q5JPE7 1267 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 NOL9Q5SY16 702 aaKnown RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 KIAA0408Q6ZU52 694 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 SLC9A7Q96T83 725 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 HNRNPABQ99729 332 aaKnown RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 APOBEC3GQ9HC16 384 aaKnown RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 PLA2G4CQ9UP65 541 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 TSC22D4Q9Y3Q8 395 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 PAPSS1O43252 624 aaPredicted RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 ENDOD1O94919 500 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 TYMPP19971 482 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 LPOP22079 712 aaPredicted RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 ASPAP45381 313 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 GPR15P49685 360 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 INO80DQ53TQ3 878 aaPredicted RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 ZCCHC8Q6NZY4 707 aaKnown RBP12.98□□□□□ -0.33
BRPF3-203ENST00000441123 FBXL18Q96ME1 805 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 PGLYRP2Q96PD5 576 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 REEP1Q9H902 201 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 HMG20AQ9NP66 347 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 ARL15Q9NXU5 204 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 MAGEL2Q9UJ55 1249 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 HES2Q9Y543 173 aa12.98□□□□□ -0.33
BRPF3-203ENST00000441123 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
BRPF3-203ENST00000441123 KRT87PA6NCN2 255 aa12.97□□□□□ -0.33
BRPF3-203ENST00000441123 MFSD11O43934 449 aa12.97□□□□□ -0.33
BRPF3-203ENST00000441123 MED26O95402 600 aa12.97□□□□□ -0.33
BRPF3-203ENST00000441123 AMHP03971 560 aa12.97□□□□□ -0.33
BRPF3-203ENST00000441123 CSH1P0DML2 217 aa12.97□□□□□ -0.33
BRPF3-203ENST00000441123 CSH2P0DML3 217 aa12.97□□□□□ -0.33
BRPF3-203ENST00000441123 WARSP23381 471 aaKnown RBP12.97□□□□□ -0.33
BRPF3-203ENST00000441123 BEX3Q00994 111 aa12.97□□□□□ -0.33
BRPF3-203ENST00000441123 ANKRD23Q86SG2 305 aa12.97□□□□□ -0.33
BRPF3-203ENST00000441123 PQLC1Q8N2U9 271 aa12.97□□□□□ -0.33
BRPF3-203ENST00000441123 BHMTQ93088 406 aa12.97□□□□□ -0.33
BRPF3-203ENST00000441123 SNX27Q96L92 541 aa12.97□□□□□ -0.33
BRPF3-203ENST00000441123 ZMYM5Q9UJ78 669 aa12.97□□□□□ -0.33
BRPF3-203ENST00000441123 CNTNAP1P78357 1384 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms