RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 PTPRN2Q92932 1015 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 LRIG1Q96JA1 1093 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 TDRD1Q9BXT4 1180 aaKnown RBP20.92■□□□□ 0.94
CHD3-204ENST00000439235 CPEB1Q9BZB8 566 aaKnown RBP20.92■□□□□ 0.94
CHD3-204ENST00000439235 PHACTR1Q9C0D0 580 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 NEUROG2Q9H2A3 272 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 ZDHHC6Q9H6R6 413 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 RAI2Q9Y5P3 530 aa20.92■□□□□ 0.94
CHD3-204ENST00000439235 ALOX15BO15296 676 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 EPHX1P07099 455 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 HLA-EP13747 358 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 HLA-DPA1P20036 260 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 NTSR1P30989 418 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 ADRA1AP35348 466 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 CDK18Q07002 472 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 CCINQ13939 588 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 LRRC32Q14392 662 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 SPARCL1Q14515 664 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 ELAVL3Q14576 367 aaKnown RBP20.91■□□□□ 0.94
CHD3-204ENST00000439235 HIF1AQ16665 826 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 LRRC8BQ6P9F7 803 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 PDIK1LQ8N165 341 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 PAF1Q8N7H5 531 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 OR8D1Q8WZ84 308 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 SERPINB12Q96P63 405 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 ACOX2Q99424 681 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 OSBPL1AQ9BXW6 950 aa20.91■□□□□ 0.94
CHD3-204ENST00000439235 NDRG2Q9UN36 371 aaKnown RBP20.91■□□□□ 0.94
CHD3-204ENST00000439235 PRUNE2Q8WUY3 3088 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 A0A1W2PQ67 120 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 SIN3BO75182 1162 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 ERLIN1O75477 346 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 CHRM1P11229 460 aaPredicted RBP20.9■□□□□ 0.94
CHD3-204ENST00000439235 COL9A1P20849 921 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 STARD6P59095 220 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 CDH17Q12864 832 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 TRAF2Q12933 501 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 IHHQ14623 411 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 BRD3Q15059 726 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 C2orf27AQ580R0 203 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 DNAJC21Q5F1R6 531 aaKnown RBP20.9■□□□□ 0.94
CHD3-204ENST00000439235 ARMC12Q5T9G4 340 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 CENPUQ71F23 418 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 ZNF534Q76KX8 674 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 DSG4Q86SJ6 1040 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 GSPT2Q8IYD1 628 aaKnown RBP20.9■□□□□ 0.94
CHD3-204ENST00000439235 DNAAF3Q8N9W5 541 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 CHST14Q8NCH0 376 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 ZNF641Q96N77 438 aaPredicted RBP20.9■□□□□ 0.94
CHD3-204ENST00000439235 GABRG3Q99928 467 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 ADGRE3Q9BY15 652 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 CASS4Q9NQ75 786 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 IL36AQ9UHA7 158 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 PCDHGC4Q9Y5F7 938 aa20.9■□□□□ 0.94
CHD3-204ENST00000439235 LOC285095A0A1B0GVY8 99 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 EIF3HO15372 352 aaKnown RBP eCLIP20.89■□□□□ 0.935e-6■■■□□ 14.9
CHD3-204ENST00000439235 SYNCRIPO60506 623 aaKnown RBP20.89■□□□□ 0.93
CHD3-204ENST00000439235 RNF40O75150 1001 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 USP12O75317 370 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 PIGNO95427 931 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 NDST3O95803 873 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 AGTP01019 485 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 PRNPP04156 253 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 FGF1P05230 155 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 MYBL2P10244 700 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 CD72P21854 359 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 STARD3Q14849 445 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 CFAP58Q5T655 872 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 C9orf64Q5T6V5 341 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 RANBP10Q6VN20 620 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 CAMK1DQ8IU85 385 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 OR52K1Q8NGK4 314 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 GRIN3AQ8TCU5 1115 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 NSMCE3Q96MG7 304 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 TRIB3Q96RU7 358 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 APOL2Q9BQE5 337 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 MTG2Q9H4K7 406 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 ARNT2Q9HBZ2 717 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 ZDHHC4Q9NPG8 344 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 ARGLU1Q9NWB6 273 aaPredicted RBP20.89■□□□□ 0.93
CHD3-204ENST00000439235 MUTYHQ9UIF7 546 aa20.89■□□□□ 0.93
CHD3-204ENST00000439235 CCDC151A5D8V7 595 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 KRBA1A5PL33 1030 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 HTRA2O43464 458 aaPredicted RBP20.88■□□□□ 0.93
CHD3-204ENST00000439235 PGLSO95336 258 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 KLF8O95600 359 aaPredicted RBP20.88■□□□□ 0.93
CHD3-204ENST00000439235 GKP32189 559 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 WASP42768 502 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 RPL26P61254 145 aaKnown RBP20.88■□□□□ 0.93
CHD3-204ENST00000439235 SLC1A5Q15758 541 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 TJAP1Q5JTD0 557 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 EOGTQ5NDL2 527 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 EMBQ6PCB8 327 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 GDPD4Q6W3E5 623 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 KDELC2Q7Z4H8 507 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 CAND1Q86VP6 1230 aaKnown RBP20.88■□□□□ 0.93
CHD3-204ENST00000439235 CCDC25Q86WR0 208 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 SIX5Q8N196 739 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 STK40Q8N2I9 435 aa20.88■□□□□ 0.93
CHD3-204ENST00000439235 SYNPOQ8N3V7 929 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms