RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 MB21D2Q8IYB1 491 aaPredicted RBP3.99□□□□□ -1.77
UPP2-IT1-201ENST00000439185 ZNF441Q8N8Z8 693 aa3.99□□□□□ -1.77
UPP2-IT1-201ENST00000439185 MCPH1Q8NEM0 835 aa3.99□□□□□ -1.77
UPP2-IT1-201ENST00000439185 VPS37AQ8NEZ2 397 aa3.99□□□□□ -1.77
UPP2-IT1-201ENST00000439185 OTUD7AQ8TE49 926 aaPredicted RBP3.99□□□□□ -1.77
UPP2-IT1-201ENST00000439185 POF1BQ8WVV4 589 aa3.99□□□□□ -1.77
UPP2-IT1-201ENST00000439185 LRFN5Q96NI6 719 aa3.99□□□□□ -1.77
UPP2-IT1-201ENST00000439185 PABPC3Q9H361 631 aaKnown RBP3.99□□□□□ -1.77
UPP2-IT1-201ENST00000439185 PRDM8Q9NQV8 689 aa3.99□□□□□ -1.77
UPP2-IT1-201ENST00000439185 SMARCAL1Q9NZC9 954 aa3.99□□□□□ -1.77
UPP2-IT1-201ENST00000439185 KCND3Q9UK17 655 aa3.99□□□□□ -1.77
UPP2-IT1-201ENST00000439185 SNX9Q9Y5X1 595 aa3.99□□□□□ -1.77
UPP2-IT1-201ENST00000439185 CLDN14O95500 239 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 APOHP02749 345 aaPredicted RBP3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 MTNR1AP48039 350 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 ATP12AP54707 1039 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 ZBTB17Q13105 803 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 AP5B1Q2VPB7 878 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 RUNDC3AQ59EK9 446 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 KLHL17Q6TDP4 642 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 CCDC129Q6ZRS4 1044 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 RRAGAQ7L523 313 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 ENAHQ8N8S7 591 aaPredicted RBP3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 USP13Q92995 863 aaPredicted RBP3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 RMDN3Q96TC7 470 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 TRMT61BQ9BVS5 477 aaKnown RBP3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 EGLN1Q9GZT9 426 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 EBF2Q9HAK2 575 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 TMLHEQ9NVH6 421 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 COMMD10Q9Y6G5 202 aa3.98□□□□□ -1.77
UPP2-IT1-201ENST00000439185 SERINC4A6NH21 518 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 FAM90A20PA6NIJ5 464 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 ACKR2O00590 384 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 SLC25A17O43808 307 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 FGF17O60258 216 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 GAGE7O76087 117 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 CSTBP04080 98 aaKnown RBP3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 ATP1A1P05023 1023 aaKnown RBP3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 GAGE12FP0CL80 117 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 GAGE12GP0CL81 117 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 GAGE12IP0CL82 117 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 PTPN9P43378 593 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 MVDP53602 400 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 ERVK11-1P61568 191 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 FOXO1Q12778 655 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 GAGE1Q13065 139 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 GAGE4Q13068 117 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 BLMHQ13867 455 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 BYSLQ13895 437 aaKnown RBP3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 ACCSLQ4AC99 568 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 C14orf177Q52M58 125 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 PLEKHA7Q6IQ23 1121 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 MON1AQ86VX9 555 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 CCDC105Q8IYK2 499 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 WDSUB1Q8N9V3 476 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 FSIP1Q8NA03 581 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 ATG16L2Q8NAA4 619 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 KBTBD3Q8NAB2 608 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 TRAPPC9Q96Q05 1148 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 LRRC4Q9HBW1 653 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 DACT1Q9NYF0 836 aa3.97□□□□□ -1.77
UPP2-IT1-201ENST00000439185 SLC22A3O75751 556 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 TBX6O95947 436 aaPredicted RBP3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 LDHAP00338 332 aaKnown RBP3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 AMBPP02760 352 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 CTPS1P17812 591 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 LIFRP42702 1097 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 CLCN3P51790 818 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 ARHGAP8P85298 464 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 IL13RA2Q14627 380 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 ME3Q16798 604 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 CCDC38Q502W7 563 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 C10orf62Q5T681 223 aaPredicted RBP3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 PLA2G4FQ68DD2 849 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 RASGRP2Q7LDG7 609 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 DENND6AQ8IWF6 608 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 CACNA2D3Q8IZS8 1091 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 RNF183Q96D59 192 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 CSF3RQ99062 836 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 MMTAG2Q9BU76 263 aaKnown RBP3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 HERC2P3Q9BVR0 1158 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 GFRA4Q9GZZ7 299 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 PLEKHA2Q9HB19 425 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 ATP8A2Q9NTI2 1148 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 ZFP57Q9NU63 452 aa3.96□□□□□ -1.78
UPP2-IT1-201ENST00000439185 CPED1A4D0V7 1026 aa3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 PEX14O75381 377 aa3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 METTL18O95568 372 aa3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 CETPP11597 493 aa3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 GJC1P36383 396 aa3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 SLC18A2Q05940 514 aa3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 ZNF155Q12901 538 aaPredicted RBP3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 TRIM14Q14142 442 aa3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 RPE65Q16518 533 aa3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 TANGO2Q6ICL3 276 aa3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 LIN54Q6MZP7 749 aa3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 SYT13Q7L8C5 426 aa3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 SLC26A9Q7LBE3 791 aa3.95□□□□□ -1.78
UPP2-IT1-201ENST00000439185 SFR1Q86XK3 245 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms