RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 MCMBPQ9BTE3 642 aa15.52■□□□□ 0.07
SGCE-205ENST00000437425 ADGRE3Q9BY15 652 aa15.52■□□□□ 0.07
SGCE-205ENST00000437425 MANSC1Q9H8J5 431 aa15.52■□□□□ 0.07
SGCE-205ENST00000437425 PCMTD2Q9NV79 361 aa15.52■□□□□ 0.07
SGCE-205ENST00000437425 FGFR1OP2Q9NVK5 253 aa15.52■□□□□ 0.07
SGCE-205ENST00000437425 MID2Q9UJV3 735 aa15.52■□□□□ 0.07
SGCE-205ENST00000437425 VPS28Q9UK41 221 aa15.52■□□□□ 0.07
SGCE-205ENST00000437425 ANKRD6Q9Y2G4 727 aa15.52■□□□□ 0.07
SGCE-205ENST00000437425 USP15Q9Y4E8 981 aaPredicted RBP15.52■□□□□ 0.07
SGCE-205ENST00000437425 OR51B4Q9Y5P0 310 aa15.52■□□□□ 0.07
SGCE-205ENST00000437425 PSAT1Q9Y617 370 aa15.52■□□□□ 0.07
SGCE-205ENST00000437425 DENND4CQ5VZ89 1909 aa15.52■□□□□ 0.07
SGCE-205ENST00000437425 TPP1O14773 563 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 ZMPSTE24O75844 475 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 VAPBO95292 243 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 CRTAMO95727 393 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 APOA4P06727 396 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 NEFHP12036 1026 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 COL6A2P12110 1019 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 FOXN2P32314 431 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 SERPINB4P48594 390 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 MSLNQ13421 630 aaPredicted RBP15.51■□□□□ 0.07
SGCE-205ENST00000437425 CYTH1Q15438 398 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 CCDC153Q494R4 210 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 GPR158Q5T848 1215 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 FSTL4Q6MZW2 842 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 ESRP1Q6NXG1 681 aaKnown RBP15.51■□□□□ 0.07
SGCE-205ENST00000437425 C6orf89Q6UWU4 347 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 SPATA21Q7Z572 469 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 CMTM8Q8IZV2 173 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 DCLK2Q8N568 766 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 FIBINQ8TAL6 211 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 C17orf80Q9BSJ5 609 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 SLC46A2Q9BY10 475 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 SLC13A1Q9BZW2 595 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 TBC1D14Q9P2M4 693 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 SLC17A7Q9P2U7 560 aa15.51■□□□□ 0.07
SGCE-205ENST00000437425 MUSKO15146 869 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 EDF1O60869 148 aaKnown RBP15.5■□□□□ 0.07
SGCE-205ENST00000437425 CLASP2O75122 1294 aaKnown RBP15.5■□□□□ 0.07
SGCE-205ENST00000437425 HOXB8P17481 243 aaPredicted RBP15.5■□□□□ 0.07
SGCE-205ENST00000437425 CHRNA4P43681 627 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 CSNK1DP48730 415 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 PLK1P53350 603 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 ARF5P84085 180 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 ZXDBP98169 803 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 ACVR1Q04771 509 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 CNGA3Q16281 694 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 PRPF38BQ5VTL8 546 aaKnown RBP15.5■□□□□ 0.07
SGCE-205ENST00000437425 NEPROQ6NW34 567 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 FOXR1Q6PIV2 292 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 C2CD4AQ8NCU7 369 aaPredicted RBP15.5■□□□□ 0.07
SGCE-205ENST00000437425 SHKBP1Q8TBC3 707 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 ZNF398Q8TD17 642 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 SLC22A17Q8WUG5 538 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 STYXQ8WUJ0 223 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 SREK1Q8WXA9 508 aaKnown RBP15.5■□□□□ 0.07
SGCE-205ENST00000437425 OTUB2Q96DC9 234 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 VPS39Q96JC1 886 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 TSNARE1Q96NA8 513 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 TRIB3Q96RU7 358 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 AGAP2Q99490 1192 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 MFSD1Q9H3U5 465 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 NOD2Q9HC29 1040 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 SNX15Q9NRS6 342 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 DNMT3BQ9UBC3 853 aaKnown RBP15.5■□□□□ 0.07
SGCE-205ENST00000437425 PHTF1Q9UMS5 762 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 ARL2BPQ9Y2Y0 163 aa15.5■□□□□ 0.07
SGCE-205ENST00000437425 TMCC1O94876 653 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 RHOP08100 348 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 TROVE2P10155 538 aaKnown RBP eCLIP15.49■□□□□ 0.07
SGCE-205ENST00000437425 SYN1P17600 705 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 CRABP2P29373 138 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 SCNN1BP51168 640 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 ERVK-21P61565 698 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 AP1S1P61966 158 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 PRAMEP78395 509 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 PDE1CQ14123 709 aaPredicted RBP15.49■□□□□ 0.07
SGCE-205ENST00000437425 TAF1BQ53T94 588 aaPredicted RBP15.49■□□□□ 0.07
SGCE-205ENST00000437425 KDELC2Q7Z4H8 507 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 ZC3HC1Q86WB0 502 aaKnown RBP15.49■□□□□ 0.07
SGCE-205ENST00000437425 BBS7Q8IWZ6 715 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 GBP7Q8N8V2 638 aaPredicted RBP15.49■□□□□ 0.07
SGCE-205ENST00000437425 SH3RF2Q8TEC5 729 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 ALG14Q96F25 216 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 ZNF778Q96MU6 729 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 LMAN2LQ9H0V9 348 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 TDP1Q9NUW8 608 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.49■□□□□ 0.07
SGCE-205ENST00000437425 HACD3Q9P035 362 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 KLHL14Q9P2G3 628 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 TLK1Q9UKI8 766 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 CORO1CQ9ULV4 474 aaPredicted RBP15.49■□□□□ 0.07
SGCE-205ENST00000437425 MIA3Q5JRA6 1907 aa15.49■□□□□ 0.07
SGCE-205ENST00000437425 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.48■□□□□ 0.07
SGCE-205ENST00000437425 SLC9A3R1O14745 358 aaPredicted RBP15.48■□□□□ 0.07
SGCE-205ENST00000437425 TGDSO95455 350 aa15.48■□□□□ 0.07
SGCE-205ENST00000437425 WEE1P30291 646 aa15.48■□□□□ 0.07
SGCE-205ENST00000437425 CSKP41240 450 aa15.48■□□□□ 0.07
SGCE-205ENST00000437425 CD151P48509 253 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms