RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 MARC1Q5VT66 337 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 IZUMO3Q5VZ72 239 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 HIBCHQ6NVY1 386 aaPredicted RBP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 FBXL19Q6PCT2 694 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 LINGO4Q6UY18 593 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 C4orf22Q6V702 233 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 MTSS1LQ765P7 747 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 PID1Q7Z2X4 250 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ADIPOR2Q86V24 386 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 C12orf40Q86WS4 652 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ZNF354CQ86Y25 554 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 YAF2Q8IY57 180 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 PGBD5Q8N414 524 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 EIF1ADQ8N9N8 165 aaKnown RBP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 DCAF4L2Q8NA75 395 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 TTC8Q8TAM2 541 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 USP33Q8TEY7 942 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 IFT81Q8WYA0 676 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 CPT1BQ92523 772 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 RUBCNQ92622 972 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ART4Q93070 314 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ATP2A3Q93084 1043 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 CHFRQ96EP1 664 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ABHD17AQ96GS6 310 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 SNF8Q96H20 258 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ZNF599Q96NL3 588 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 NSUN5Q96P11 429 aaKnown RBP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 AGAP3Q96P47 875 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 VAT1Q99536 393 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 TRMT61BQ9BVS5 477 aaKnown RBP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 PHF7Q9BWX1 381 aaPredicted RBP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 SP110Q9HB58 689 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ATP13A2Q9NQ11 1180 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 FAM114A2Q9NRY5 505 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 RBM22Q9NW64 420 aaKnown RBP eCLIP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 GTSE1Q9NYZ3 720 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 WHRNQ9P202 907 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 PAK5Q9P286 719 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 VPS51Q9UID3 782 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 VPS28Q9UK41 221 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 TRHDEQ9UKU6 1024 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 TPX2Q9ULW0 747 aaKnown RBP7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 ATP8A1Q9Y2Q0 1164 aa7.15□□□□□ -1.26
LSM3P3-201ENST00000436601 TCRBV7S3A2A0A539 114 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 F5H423 210 aaPredicted RBP7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 K7ERQ8 282 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 MUSKO15146 869 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 TULP3O75386 442 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 MT-CO1P00395 513 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 PF4P02776 101 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 HLA-DQB2P05538 268 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 TUBBP07437 444 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 FAM153BP0C7A2 387 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 PABPC1P11940 636 aaKnown RBP7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 CD33P20138 364 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 LAMA2P24043 3122 aaKnown RBP7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 MYH10P35580 1976 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 ACTN2P35609 894 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 OPRD1P41143 372 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 MAGEA6P43360 314 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 MMP13P45452 471 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 ITGA8P53708 1063 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 PLTPP55058 493 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 TFF2Q03403 129 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 NIPAL4Q0D2K0 466 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 MESP2Q0VG99 397 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 CAMK2GQ13555 558 aaPredicted RBP7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 SEMA5AQ13591 1074 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 CUL1Q13616 776 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 IHHQ14623 411 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 KCNJ11Q14654 390 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 RFTN1Q14699 578 aaPredicted RBP7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 GEN1Q17RS7 908 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 AAK1Q2M2I8 961 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 FAM153CQ494X1 144 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 SNAP47Q5SQN1 464 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 ANKRD22Q5VYY1 191 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 TMEM215Q68D42 235 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 NAIF1Q69YI7 327 aaPredicted RBP7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 ARHGEF18Q6ZSZ5 1173 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 CCDC117Q8IWD4 279 aaPredicted RBP7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 GSPT2Q8IYD1 628 aaKnown RBP7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 SLC44A3Q8N4M1 653 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 CPA6Q8N4T0 437 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 NAT8LQ8N9F0 302 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 BBOF1Q8ND07 529 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 ARRDC2Q8TBH0 407 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 FBXO25Q8TCJ0 367 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 TTC17Q96AE7 1141 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 LRRC45Q96CN5 670 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 PWWP2AQ96N64 755 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 FERMT1Q9BQL6 677 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 MLPHQ9BV36 600 aaPredicted RBP7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 GBA3Q9H227 469 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 PIF1Q9H611 641 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 KCNK12Q9HB15 430 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 GLOD4Q9HC38 313 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 PRDM6Q9NQX0 595 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 DNAJC17Q9NVM6 304 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms