RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 EIF2DP41214 584 aaKnown RBP16.22■□□□□ 0.19
C9orf3-206ENST00000428313 PICALMQ13492 652 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 POLD3Q15054 466 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-206ENST00000428313 PLCL1Q15111 1095 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 TAF5Q15542 800 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 MAPK11Q15759 364 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 ZNF181Q2M3W8 571 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 PAGE2BQ5JRK9 111 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 LCN8Q6JVE9 175 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 GPAT2Q6NUI2 795 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 ZYG11AQ6WRX3 759 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 RNF157Q96PX1 679 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 ANKHQ9HCJ1 492 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 NECTIN3Q9NQS3 549 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 ZNF639Q9UID6 485 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 FAM149AA5PLN7 773 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 SAGE2PA6NJ88 616 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 ZSCAN5BA6NJL1 495 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 GPC4O75487 556 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 KCNK2O95069 426 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 CRHBPP24387 322 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 AXLP30530 894 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 GRIA4P48058 902 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 ALDH7A1P49419 539 aaKnown RBP16.22■□□□□ 0.19
C9orf3-206ENST00000428313 CDH6P55285 790 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 SEMA5AQ13591 1074 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 CDK10Q15131 360 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 CDONQ4KMG0 1287 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 TBC1D10BQ4KMP7 808 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-206ENST00000428313 FAM102BQ5T8I3 360 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 CMC1Q7Z7K0 106 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 RALGPS2Q86X27 583 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-206ENST00000428313 CDKL3Q8IVW4 592 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-206ENST00000428313 DCLK2Q8N568 766 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 PLD5Q8N7P1 536 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 SLC43A3Q8NBI5 491 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 NAT9Q9BTE0 207 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 LRRC40Q9H9A6 602 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 INTS10Q9NVR2 710 aaKnown RBP16.22■□□□□ 0.19
C9orf3-206ENST00000428313 ZNF221Q9UK13 617 aa16.22■□□□□ 0.19
C9orf3-206ENST00000428313 FBXO9Q9UK97 447 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-206ENST00000428313 MRASO14807 208 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 CCNKO75909 580 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 NADKO95544 446 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-206ENST00000428313 METTL18O95568 372 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 GPIP06744 558 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 ELK4P28324 431 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 HSPA14Q0VDF9 509 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 BNIP2Q12982 314 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 TWF2Q6IBS0 349 aaKnown RBP16.21■□□□□ 0.19
C9orf3-206ENST00000428313 LYSMD2Q8IV50 215 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 TRPV3Q8NET8 790 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 OR7A2PQ8NGA2 310 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 RHOXF1Q8NHV9 184 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 CXorf38Q8TB03 319 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 HDAC2Q92769 488 aaKnown RBP16.21■□□□□ 0.19
C9orf3-206ENST00000428313 ZBED2Q9BTP6 218 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 SLC25A23Q9BV35 468 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 KMT5AQ9NQR1 393 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 SNTG2Q9NY99 539 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 GPSM3Q9Y4H4 160 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 M0R3G1 203 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 CDK2AP1O14519 115 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 SDHDO14521 159 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 TOR1BO14657 336 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 SNAP29O95721 258 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 ALBP02768 609 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 JUNP05412 331 aaKnown RBP16.21■□□□□ 0.19
C9orf3-206ENST00000428313 SNRPB2P08579 225 aaKnown RBP16.21■□□□□ 0.19
C9orf3-206ENST00000428313 IMPDH1P20839 514 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 YWHABP31946 246 aaKnown RBP16.21■□□□□ 0.19
C9orf3-206ENST00000428313 SPRP35270 261 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-206ENST00000428313 SLC7A2P52569 658 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 RPS6P62753 249 aaKnown RBP16.21■□□□□ 0.19
C9orf3-206ENST00000428313 TSPY1Q01534 308 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 FKBP9P1Q75LS8 142 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-206ENST00000428313 ADGRG5Q8IZF4 528 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 PQLC3Q8N755 202 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 GRPEL2Q8TAA5 225 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 HMGCLL1Q8TB92 370 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 HTRA1Q92743 480 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 HDAC10Q969S8 669 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 ROPN1LQ96C74 230 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 SPATA17Q96L03 361 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 UBXN10Q96LJ8 280 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 DACH2Q96NX9 599 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 RBBP8Q99708 897 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 NTPCRQ9BSD7 190 aaKnown RBP16.21■□□□□ 0.19
C9orf3-206ENST00000428313 SPC25Q9HBM1 224 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 MORF4L1Q9UBU8 362 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 BAG5Q9UL15 447 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 AP4E1Q9UPM8 1137 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 MAU2Q9Y6X3 613 aa16.21■□□□□ 0.19
C9orf3-206ENST00000428313 A0A096LPK6 155 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 TTC24A2A3L6 582 aaPredicted RBP16.2■□□□□ 0.18
C9orf3-206ENST00000428313 CCRL2O00421 344 aa16.2■□□□□ 0.18
C9orf3-206ENST00000428313 HNRNPDLO14979 420 aaKnown RBP16.2■□□□□ 0.18
C9orf3-206ENST00000428313 MTRF1O75570 445 aaKnown RBP16.2■□□□□ 0.18
C9orf3-206ENST00000428313 CABYRO75952 493 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms