RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 TMEM198Q66K66 360 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 TRNP1Q6NT89 227 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 TAS1R3Q7RTX0 852 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 GPD1LQ8N335 351 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 HDAC11Q96DB2 347 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 PEBP4Q96S96 227 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 GDF15Q99988 308 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 SIAEQ9HAT2 523 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 TNS1Q9HBL0 1735 aaKnown RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 MORF4L1Q9UBU8 362 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 ERI2A8K979 691 aaKnown RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 B8ZZF3 427 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 GIPC1O14908 333 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 BCAS1O75363 584 aaPredicted RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 TRPA1O75762 1119 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 ALPLP05186 524 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 ABCB1P08183 1280 aaPredicted RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 FCGR1AP12314 374 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 IL1RNP18510 177 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 RPL10P27635 214 aaKnown RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 BMPR1AP36894 532 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 DNAJB13P59910 316 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 MRPS9P82933 396 aaKnown RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 DHRSXQ8N5I4 330 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.19□□□□□ -1.582e-6■■■■■ 54.9
RIF1-203ENST00000428287 NAA50Q9GZZ1 169 aaKnown RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 SLC52A3Q9NQ40 469 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 MAP10Q9P2G4 905 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 N6AMT1Q9Y5N5 214 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 APC2O95996 2303 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 CADP27708 2225 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 SBK3P0C264 359 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 NCF2P19878 526 aaPredicted RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 PSME3P61289 254 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 ART3Q13508 389 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 ZNF846Q147U1 533 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 HIST2H2ACQ16777 129 aaPredicted RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 ZC3H12BQ5HYM0 836 aaKnown RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 WDR44Q5JSH3 913 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 SYT6Q5T7P8 510 aaPredicted RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 CHST15Q7LFX5 561 aaPredicted RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 ZC3H7AQ8IWR0 971 aaKnown RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 SPARTQ8N0X7 666 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 PARP8Q8N3A8 854 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 OR52E4Q8NGH9 312 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 SNX19Q92543 992 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 CDKL2Q92772 493 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 SNX25Q9H3E2 840 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 NMRAL1Q9HBL8 299 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 TM9SF3Q9HD45 589 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 SDR39U1Q9NRG7 319 aaPredicted RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 TLL2Q9Y6L7 1015 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 C1orf232A0A0U1RR37 186 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 H0Y858 1186 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 HNRNPDLO14979 420 aaKnown RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 TOM1L1O75674 476 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 NAT1P18440 290 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 TGM2P21980 687 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 GJC1P36383 396 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 GPD2P43304 727 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 HTR3AP46098 478 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 ILF2Q12905 390 aaKnown RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 ITGADQ13349 1161 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 BMPR2Q13873 1038 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 LRIT3Q3SXY7 679 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 AASDHQ4L235 1098 aaPredicted RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 TMEM26Q6ZUK4 368 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 HOPXQ9BPY8 73 aaPredicted RBP5.19□□□□□ -1.58
RIF1-203ENST00000428287 TLR9Q9NR96 1032 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 TMEM45AQ9NWC5 275 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 TMX2Q9Y320 296 aa5.19□□□□□ -1.58
RIF1-203ENST00000428287 CNTN5O94779 1100 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 PTTG1O95997 202 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 LTFP02788 710 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 TCN1P20061 433 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 ATP2B4P23634 1241 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 FASP25445 335 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 ADORA2AP29274 412 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SFNP31947 248 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 KRT6CP48668 564 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 NDST1P52848 882 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 ROR1Q01973 937 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 AQP6Q13520 282 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 ZYXQ15942 572 aaKnown RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 DUSP7Q16829 419 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SMTNL2Q2TAL5 461 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 C16orf87Q6PH81 154 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 SCML4Q8N228 414 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 MARCH10Q8NA82 808 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 CXorf38Q8TB03 319 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 PHF10Q8WUB8 498 aaKnown RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 RASSF5Q8WWW0 418 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 ZNF300Q96RE9 604 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 C11orf84Q9BUA3 381 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 OR2B2Q9GZK3 357 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 RNPEPQ9H4A4 650 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 RCOR3Q9P2K3 495 aaPredicted RBP5.18□□□□□ -1.58
RIF1-203ENST00000428287 PCDHGA11Q9Y5H2 935 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 UBIAD1Q9Y5Z9 338 aa5.18□□□□□ -1.58
RIF1-203ENST00000428287 XPO1O14980 1071 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms