RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 GCNT1Q02742 428 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 CHRNDQ07001 517 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TNK2Q07912 1038 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 SMARCB1Q12824 385 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TRAF3Q13114 568 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 SEMA3BQ13214 749 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 NME3Q13232 169 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 AP3B2Q13367 1082 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TUBB3Q13509 450 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 CAMK1Q14012 370 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TFDP2Q14188 446 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 PCSK7Q16549 785 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 PGS1Q32NB8 556 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 PLEKHG6Q3KR16 790 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ALFQ53S48 1182 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 MTX3Q5HYI7 312 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 GNASQ5JWF2 1037 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 SPANXN2Q5MJ10 180 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TBCELQ5QJ74 424 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 CLVS2Q5SYC1 327 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 UBAP2Q5T6F2 1119 aaKnown RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 MBLAC2Q68D91 279 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 GTF2IRD2BQ6EKJ0 949 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 STYK1Q6J9G0 422 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 FAM45BPQ6NSW5 357 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 AADACL2Q6P093 401 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 FAM171BQ6P995 826 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 EPGNQ6UW88 154 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF782Q6ZMW2 699 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 BEND5Q7L4P6 421 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 GTF2IRD2Q86UP8 949 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 RAB43Q86YS6 212 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 WDR49Q8IV35 697 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 LIX1LQ8IVB5 337 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZDHHC14Q8IZN3 488 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZNF444Q8N0Y2 327 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 AADATQ8N5Z0 425 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 NAT8LQ8N9F0 302 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 SMG8Q8ND04 991 aaKnown RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 PJA1Q8NG27 643 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 OR13J1Q8NGT2 312 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 FAM45AQ8TCE6 357 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 LRRN4Q8WUT4 740 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 DEPDC1BQ8WUY9 529 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ANKRD49Q8WVL7 239 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TFB1MQ8WVM0 346 aaKnown RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 DNAJA4Q8WW22 397 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 SHC3Q92529 594 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 AP2M1Q96CW1 435 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TUBGCP3Q96CW5 907 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 MRRFQ96E11 262 aaKnown RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 CDCA5Q96FF9 252 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 AURKBQ96GD4 344 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 MAGEB10Q96LZ2 347 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 FBXL18Q96ME1 805 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 MBOAT7Q96N66 472 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 SORT1Q99523 831 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 HOPXQ9BPY8 73 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 KCTD14Q9BQ13 255 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 C17orf62Q9BQA9 187 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TSEN34Q9BSV6 310 aaKnown RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ISCA1Q9BUE6 129 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 DSN1Q9H410 356 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 PRDM8Q9NQV8 689 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 SACM1LQ9NTJ5 587 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ASNSD1Q9NWL6 643 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ABI2Q9NYB9 513 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 IFT80Q9P2H3 777 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 PI4KBQ9UBF8 816 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 MARCOQ9UEW3 520 aaPredicted RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TEKT2Q9UIF3 430 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 KLHL21Q9UJP4 597 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 NOCTQ9UK39 431 aaKnown RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 CPSF3Q9UKF6 684 aaKnown RBP5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ZBTB21Q9ULJ3 1066 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 KIAA1024Q9UPX6 916 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 POLHQ9Y253 713 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 ANKRD6Q9Y2G4 727 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 RAP2CQ9Y3L5 183 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 TCAF1Q9Y4C2 921 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 MAP4K5Q9Y4K4 846 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 PCDHGB3Q9Y5G1 929 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 PCDHGB1Q9Y5G3 927 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 STON1Q9Y6Q2 735 aa5.66□□□□□ -1.5
VTI1BP4-201ENST00000427516 CCDC195A0A1B0GUA6 201 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 A0A1B0GW55 424 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 DHRS12A0PJE2 317 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 HMX3A6NHT5 357 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 KBTBD13C9JR72 458 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 FOXN3O00409 490 aaPredicted RBP5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 PLK4O00444 970 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 GNB5O14775 395 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 PLSCR1O15162 318 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 B4GALT4O60513 344 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 TULP3O75386 442 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 RNASEH2AO75792 299 aaKnown RBP5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 ADAMTS2O95450 1211 aa5.65□□□□□ -1.5
VTI1BP4-201ENST00000427516 LSM8O95777 96 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms