RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 MS4A14Q96JA4 679 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 FRMD8P1Q9BZ68 369 aaPredicted RBP24.73■■□□□ 1.55
VEGFA-209ENST00000425836 PCDHGC4Q9Y5F7 938 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 FANCGO15287 622 aa24.72■■□□□ 1.55
VEGFA-209ENST00000425836 PLRG1O43660 514 aaKnown RBP24.72■■□□□ 1.55
VEGFA-209ENST00000425836 SEMA4FO95754 770 aa24.72■■□□□ 1.55
VEGFA-209ENST00000425836 ADRB3P13945 408 aa24.72■■□□□ 1.55
VEGFA-209ENST00000425836 TAS2R38P59533 333 aa24.72■■□□□ 1.55
VEGFA-209ENST00000425836 LPCAT2Q7L5N7 544 aa24.72■■□□□ 1.55
VEGFA-209ENST00000425836 ZSWIM9Q86XI8 627 aa24.72■■□□□ 1.55
VEGFA-209ENST00000425836 ZNF567Q8N184 647 aa24.72■■□□□ 1.55
VEGFA-209ENST00000425836 MAIP1Q8WWC4 291 aa24.72■■□□□ 1.55
VEGFA-209ENST00000425836 ECHDC3Q96DC8 303 aa24.72■■□□□ 1.55
VEGFA-209ENST00000425836 VAT1Q99536 393 aa24.72■■□□□ 1.55
VEGFA-209ENST00000425836 NAPGQ99747 312 aaPredicted RBP24.72■■□□□ 1.55
VEGFA-209ENST00000425836 TTC7AQ9ULT0 858 aaPredicted RBP24.72■■□□□ 1.55
VEGFA-209ENST00000425836 MUC6Q6W4X9 2439 aa24.72■■□□□ 1.55
VEGFA-209ENST00000425836 TSPAN11A1L157 253 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 KCNN4O15554 427 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 HTRA2O43464 458 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-209ENST00000425836 LIASO43766 372 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 TIMP2P16035 220 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 CD68P34810 354 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-209ENST00000425836 ELF2Q15723 593 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 LPAL2Q16609 132 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 PAPD7Q5XG87 772 aaKnown RBP24.71■■□□□ 1.55
VEGFA-209ENST00000425836 SEMA4AQ9H3S1 761 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 C6orf106Q9H6K1 298 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-209ENST00000425836 GLOD4Q9HC38 313 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 KLHL8Q9P2G9 620 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-209ENST00000425836 FAM47DPA6NHR8 397 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 CES2O00748 559 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 SOCS5O75159 536 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 RHOBTB1O94844 696 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 MMP2P08253 660 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 TRAF2Q12933 501 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 SPDYCQ5MJ68 293 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 BRAT1Q6PJG6 821 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 PID1Q7Z2X4 250 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 TTC7BQ86TV6 843 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 SUMF1Q8NBK3 374 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 CADM4Q8NFZ8 388 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 NKD2Q969F2 451 aaPredicted RBP24.71■■□□□ 1.55
VEGFA-209ENST00000425836 FERMT1Q9BQL6 677 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 SLC25A51Q9H1U9 297 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 TRHDEQ9UKU6 1024 aa24.71■■□□□ 1.55
VEGFA-209ENST00000425836 CTAGE9A4FU28 777 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 ZNF185O15231 689 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 SERPINF2P08697 491 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 PRLRP16471 622 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 TCP1P17987 556 aaKnown RBP24.7■■□□□ 1.54
VEGFA-209ENST00000425836 ABL2P42684 1182 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 ETF1P62495 437 aaKnown RBP24.7■■□□□ 1.54
VEGFA-209ENST00000425836 SKOR1P84550 965 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 OASLQ15646 514 aaKnown RBP24.7■■□□□ 1.54
VEGFA-209ENST00000425836 CCNG2Q16589 344 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 CFAP58Q5T655 872 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 PRPF39Q86UA1 669 aaKnown RBP24.7■■□□□ 1.54
VEGFA-209ENST00000425836 SLC41A1Q8IVJ1 513 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 OR2T34Q8NGX1 318 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 IMP4Q96G21 291 aaKnown RBP24.7■■□□□ 1.54
VEGFA-209ENST00000425836 PHOX2BQ99453 314 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 TMEM121Q9BTD3 319 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 KDM4CQ9H3R0 1056 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 SMG5Q9UPR3 1016 aaKnown RBP24.7■■□□□ 1.54
VEGFA-209ENST00000425836 RAI2Q9Y5P3 530 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 EML5Q05BV3 1969 aa24.7■■□□□ 1.54
VEGFA-209ENST00000425836 LRRC72A6NJI9 287 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 C10orf142B7Z368 130 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 ZNF189O75820 626 aaPredicted RBP24.69■■□□□ 1.54
VEGFA-209ENST00000425836 CD86P42081 329 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 PTGER3P43115 390 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 SNX1Q13596 522 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 UGP2Q16851 508 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 FAM71DQ8N9W8 422 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 ACTRT1Q8TDG2 376 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 RAB7BQ96AH8 199 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 PCED1AQ9H1Q7 454 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 SMARCAL1Q9NZC9 954 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 RAB23Q9ULC3 237 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 FADS3Q9Y5Q0 445 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 SHROOM3Q8TF72 1996 aa24.69■■□□□ 1.54
VEGFA-209ENST00000425836 TBC1D3DA0A087WVF3 549 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 TBC1D3IA0A087WXS9 549 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 TBC1D3EA0A087X179 549 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 TBC1D3KA0A087X1G2 549 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 TBC1D3FA6NER0 549 aaPredicted RBP24.68■■□□□ 1.54
VEGFA-209ENST00000425836 METTL12A8MUP2 240 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 TBC1D3LB9A6J9 549 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 PROB1E7EW31 1015 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 TBC1D3HP0C7X1 549 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 LRRC73Q5JTD7 316 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 TBC1D3GQ6DHY5 549 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 TBC1D3CQ6IPX1 549 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 ARMCX6Q7L4S7 300 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 TBC1D3Q8IZP1 549 aaPredicted RBP24.68■■□□□ 1.54
VEGFA-209ENST00000425836 SPOCK2Q92563 424 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 TADA1Q96BN2 335 aa24.68■■□□□ 1.54
VEGFA-209ENST00000425836 RBM15Q96T37 977 aaKnown RBP eCLIP24.68■■□□□ 1.549e-9■■□□□ 11.4
VEGFA-209ENST00000425836 PCDHB9Q9Y5E1 797 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms