RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 SLFN11Q7Z7L1 901 aa13.17□□□□□ -0.3
VRK3-203ENST00000424804 ASB12Q8WXK4 309 aa13.17□□□□□ -0.3
VRK3-203ENST00000424804 VCPIP1Q96JH7 1222 aa13.17□□□□□ -0.3
VRK3-203ENST00000424804 FEM1CQ96JP0 617 aa13.17□□□□□ -0.3
VRK3-203ENST00000424804 TRIM5Q9C035 493 aa13.17□□□□□ -0.3
VRK3-203ENST00000424804 KLC2Q9H0B6 622 aa13.17□□□□□ -0.3
VRK3-203ENST00000424804 NLGN3Q9NZ94 848 aa13.17□□□□□ -0.3
VRK3-203ENST00000424804 HECAQ9UBI9 543 aaPredicted RBP13.17□□□□□ -0.3
VRK3-203ENST00000424804 ITM2BQ9Y287 266 aa13.17□□□□□ -0.3
VRK3-203ENST00000424804 BZW2Q9Y6E2 419 aaKnown RBP13.17□□□□□ -0.3
VRK3-203ENST00000424804 A6NNZ2 444 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 AREL1O15033 823 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 C1QL1O75973 258 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 GZMAP12544 262 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 NME1P15531 152 aaKnown RBP13.16□□□□□ -0.3
VRK3-203ENST00000424804 RHOQP17081 205 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 ITIH2P19823 946 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 OGDHQ02218 1023 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
VRK3-203ENST00000424804 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 EFHC2Q5JST6 749 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 CCDC122Q5T0U0 273 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 KIAA1161Q6NSJ0 714 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 LEKR1Q6ZMV7 388 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 ZNF354CQ86Y25 554 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 DCP2Q8IU60 420 aaKnown RBP13.16□□□□□ -0.3
VRK3-203ENST00000424804 PYROXD2Q8N2H3 581 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 OR6K2Q8NGY2 324 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 FAM174AQ8TBP5 190 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 SYN2Q92777 582 aaPredicted RBP13.16□□□□□ -0.3
VRK3-203ENST00000424804 FGF11Q92914 225 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 CENPTQ96BT3 561 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 TRIM11Q96F44 468 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 HIC2Q96JB3 615 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 CNPY3Q9BT09 278 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 TM6SF2Q9BZW4 377 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 TCEAL2Q9H3H9 227 aaPredicted RBP13.16□□□□□ -0.3
VRK3-203ENST00000424804 DEF6Q9H4E7 631 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 RETREG1Q9H6L5 497 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 DYRK4Q9NR20 520 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 ZNHIT6Q9NWK9 470 aaKnown RBP13.16□□□□□ -0.3
VRK3-203ENST00000424804 DNAI1Q9UI46 699 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 SCINQ9Y6U3 715 aa13.16□□□□□ -0.3
VRK3-203ENST00000424804 A0A087X0T9 212 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 CREB3O43889 395 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 GSRP00390 522 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 PRB1P04280 392 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 FAM228BP0C875 321 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
VRK3-203ENST00000424804 RECQLP46063 649 aaPredicted RBP13.15□□□□□ -0.3
VRK3-203ENST00000424804 MAPKAPK2P49137 400 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 DNA2P51530 1060 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 TRIM14Q14142 442 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 MYLK3Q32MK0 819 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 TBC1D25Q3MII6 688 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 ZNF805Q5CZA5 627 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 PPP1R15BQ5SWA1 713 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 PLEKHA7Q6IQ23 1121 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 VSTM4Q8IW00 320 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 NETO2Q8NC67 525 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 ZNF548Q8NEK5 533 aaPredicted RBP13.15□□□□□ -0.3
VRK3-203ENST00000424804 TBC1D31Q96DN5 1066 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 PRR11Q96HE9 360 aaPredicted RBP13.15□□□□□ -0.3
VRK3-203ENST00000424804 PPP1R16AQ96I34 528 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 TRIM7Q9C029 511 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 MAGEH1Q9H213 219 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 ZDHHC6Q9H6R6 413 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 MRPL47Q9HD33 250 aaKnown RBP13.15□□□□□ -0.3
VRK3-203ENST00000424804 GPATCH2LQ9NWQ4 482 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 DNAJC28Q9NX36 388 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 PCSK1NQ9UHG2 260 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 SSUH2Q9Y2M2 353 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 CSNK1G3Q9Y6M4 447 aa13.15□□□□□ -0.3
VRK3-203ENST00000424804 TSPAN6O43657 245 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 KDELR3O43731 214 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 GCATO75600 419 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 RNF8O76064 485 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 DXOO77932 396 aaKnown RBP13.14□□□□□ -0.31
VRK3-203ENST00000424804 GP1BAP07359 652 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 MYBL1P10243 752 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 IGFALSP35858 605 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 RABIFP47224 123 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 ADKP55263 362 aaKnown RBP13.14□□□□□ -0.31
VRK3-203ENST00000424804 HNRNPKP61978 463 aaKnown RBP eCLIP13.14□□□□□ -0.31
VRK3-203ENST00000424804 DAB2P98082 770 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 TLE3Q04726 772 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 ATXN7L2Q5T6C5 722 aaPredicted RBP13.14□□□□□ -0.31
VRK3-203ENST00000424804 PTAR1Q7Z6K3 402 aaPredicted RBP13.14□□□□□ -0.31
VRK3-203ENST00000424804 OR2AP1Q8NGE2 309 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 NTAN1Q96AB6 310 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 RAB7BQ96AH8 199 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 KLHL32Q96NJ5 620 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 UBL7Q96S82 380 aaPredicted RBP13.14□□□□□ -0.31
VRK3-203ENST00000424804 THAP2Q9H0W7 228 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 MBNL1Q9NR56 388 aaKnown RBP13.14□□□□□ -0.31
VRK3-203ENST00000424804 FZD10Q9ULW2 581 aa13.14□□□□□ -0.31
VRK3-203ENST00000424804 LRP4O75096 1905 aa13.13□□□□□ -0.31
VRK3-203ENST00000424804 EME2A4GXA9 379 aaPredicted RBP13.13□□□□□ -0.31
VRK3-203ENST00000424804 TMEM191CA6NGB0 347 aa13.13□□□□□ -0.31
VRK3-203ENST00000424804 WASH4PA8MWX3 477 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms