RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ZNF211Q13398 564 aaPredicted RBP18.69■□□□□ 0.58
NUP50-207ENST00000424634 FZD2Q14332 565 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 RFX8Q6ZV50 586 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 PTAR1Q7Z6K3 402 aaPredicted RBP18.69■□□□□ 0.58
NUP50-207ENST00000424634 TMPRSS12Q86WS5 348 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 DCP2Q8IU60 420 aaKnown RBP18.69■□□□□ 0.58
NUP50-207ENST00000424634 FAM174AQ8TBP5 190 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 CENPTQ96BT3 561 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 CCDC86Q9H6F5 360 aaKnown RBP18.69■□□□□ 0.58
NUP50-207ENST00000424634 CWC15Q9P013 229 aaKnown RBP18.69■□□□□ 0.58
NUP50-207ENST00000424634 DKK3Q9UBP4 350 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 KLF15Q9UIH9 416 aa18.69■□□□□ 0.58
NUP50-207ENST00000424634 ITPR1Q14643 2758 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 SPTY2D1-AS1A0A0U1RR47 76 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 A0A1W2PQJ5 194 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 EIF3CLB5ME19 914 aaKnown RBP18.68■□□□□ 0.58
NUP50-207ENST00000424634 PRPSAP2O60256 369 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 BUB1BO60566 1050 aaPredicted RBP18.68■□□□□ 0.58
NUP50-207ENST00000424634 MMP20O60882 483 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 PIGNO95427 931 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 TCF4P15884 667 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 IL1R2P27930 398 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 RGRP47804 291 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 PPP6R3Q5H9R7 873 aaPredicted RBP18.68■□□□□ 0.58
NUP50-207ENST00000424634 ARHGAP36Q6ZRI8 547 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 ZSCAN30Q86W11 494 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 TP53INP2Q8IXH6 220 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 NPWQ8N729 165 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 CPLX3Q8WVH0 158 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 SYN2Q92777 582 aaPredicted RBP18.68■□□□□ 0.58
NUP50-207ENST00000424634 IFT43Q96FT9 208 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 EIF3CQ99613 913 aaKnown RBP18.68■□□□□ 0.58
NUP50-207ENST00000424634 DNAJC28Q9NX36 388 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 DONSONQ9NYP3 566 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 SCINQ9Y6U3 715 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 ANKRD36A6QL64 1941 aa18.68■□□□□ 0.58
NUP50-207ENST00000424634 FAM208BQ5VWN6 2430 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 ARHGAP42A6NI28 874 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 FPGTO14772 594 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 FFAR2O15552 330 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 DAPK3O43293 454 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 MYBL1P10243 752 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 ACP1P24666 158 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 RABIFP47224 123 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 HCAR3P49019 387 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 PFN3P60673 137 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 PSTKQ8IV42 348 aaKnown RBP18.67■□□□□ 0.58
NUP50-207ENST00000424634 OR4C6Q8NH72 309 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 ARHGEF26Q96DR7 871 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 TRIM11Q96F44 468 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 SUV39H2Q9H5I1 410 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 MRPL47Q9HD33 250 aaKnown RBP18.67■□□□□ 0.58
NUP50-207ENST00000424634 CAPN11Q9UMQ6 739 aa18.67■□□□□ 0.58
NUP50-207ENST00000424634 URB1O60287 2271 aaKnown RBP18.66■□□□□ 0.58
NUP50-207ENST00000424634 CSF2P04141 144 aa18.66■□□□□ 0.58
NUP50-207ENST00000424634 CDK4P11802 303 aa18.66■□□□□ 0.58
NUP50-207ENST00000424634 MYF5P13349 255 aa18.66■□□□□ 0.58
NUP50-207ENST00000424634 PCK1P35558 622 aa18.66■□□□□ 0.58
NUP50-207ENST00000424634 CYP4F3Q08477 520 aa18.66■□□□□ 0.58
NUP50-207ENST00000424634 DPYSQ14117 519 aa18.66■□□□□ 0.58
NUP50-207ENST00000424634 PDE1CQ14123 709 aaPredicted RBP18.66■□□□□ 0.58
NUP50-207ENST00000424634 TDRD12Q587J7 1177 aaKnown RBP18.66■□□□□ 0.58
NUP50-207ENST00000424634 TXNRD3NBQ6F5E7 133 aa18.66■□□□□ 0.58
NUP50-207ENST00000424634 ZSWIM9Q86XI8 627 aa18.66■□□□□ 0.58
NUP50-207ENST00000424634 TSEN2Q8NCE0 465 aaKnown RBP18.66■□□□□ 0.58
NUP50-207ENST00000424634 DENND6BQ8NEG7 585 aa18.66■□□□□ 0.58
NUP50-207ENST00000424634 HCAR2Q8TDS4 363 aa18.66■□□□□ 0.58
NUP50-207ENST00000424634 NSMCE3Q96MG7 304 aa18.66■□□□□ 0.58
NUP50-207ENST00000424634 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.66■□□□□ 0.58
NUP50-207ENST00000424634 WRAP53Q9BUR4 548 aaKnown RBP18.66■□□□□ 0.58
NUP50-207ENST00000424634 THAP2Q9H0W7 228 aa18.66■□□□□ 0.58
NUP50-207ENST00000424634 MBNL1Q9NR56 388 aaKnown RBP18.66■□□□□ 0.58
NUP50-207ENST00000424634 PNMA8BQ9ULN7 279 aaPredicted RBP18.66■□□□□ 0.58
NUP50-207ENST00000424634 BZW2Q9Y6E2 419 aaKnown RBP18.66■□□□□ 0.58
NUP50-207ENST00000424634 A0A087X0T9 212 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 TSPAN11A1L157 253 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 DFFAO00273 331 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 NEBLO76041 1014 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 TM7SF2O76062 418 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 SERPING1P05155 500 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 FAM228BP0C875 321 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 JUPP14923 745 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 IGFALSP35858 605 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 TPM4P67936 248 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 ZBED6P86452 979 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 EIF2B5Q13144 721 aaKnown RBP18.65■□□□□ 0.58
NUP50-207ENST00000424634 ILKQ13418 452 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 ACAP1Q15027 740 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 UGP2Q16851 508 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 SMTNL2Q2TAL5 461 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 TMEM52BQ4KMG9 183 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 HES3Q5TGS1 186 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 SRLQ86TD4 932 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 VPS36Q86VN1 386 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 CAMK1DQ8IU85 385 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 PDCD7Q8N8D1 485 aaKnown RBP18.65■□□□□ 0.58
NUP50-207ENST00000424634 TP53I13Q8NBR0 393 aaPredicted RBP18.65■□□□□ 0.58
NUP50-207ENST00000424634 CXorf40AQ8TE69 158 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 BTBD6Q96KE9 485 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 ETNK2Q9NVF9 386 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms