RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.9■■□□□ 1.1
SEC22C-207ENST00000423701 TTC13Q8NBP0 860 aa21.9■■□□□ 1.1
SEC22C-207ENST00000423701 OR2T34Q8NGX1 318 aa21.9■■□□□ 1.1
SEC22C-207ENST00000423701 LOXL4Q96JB6 756 aa21.9■■□□□ 1.1
SEC22C-207ENST00000423701 C10orf88Q9H8K7 445 aa21.9■■□□□ 1.1
SEC22C-207ENST00000423701 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.89■■□□□ 1.09
SEC22C-207ENST00000423701 TSPAN11A1L157 253 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 LRRC72A6NJI9 287 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 C10orf142B7Z368 130 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 TRAFD1O14545 582 aaPredicted RBP21.89■■□□□ 1.09
SEC22C-207ENST00000423701 MTSS1O43312 755 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 ATP1A1P05023 1023 aaKnown RBP21.89■■□□□ 1.09
SEC22C-207ENST00000423701 RBL1P28749 1068 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 ABL2P42684 1182 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 WASHC5Q12768 1159 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 LYSMD4Q5XG99 296 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 ASCL5Q7RTU5 278 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 ZSWIM9Q86XI8 627 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 CDKL3Q8IVW4 592 aaPredicted RBP21.89■■□□□ 1.09
SEC22C-207ENST00000423701 ARRDC2Q8TBH0 407 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 HTR3CQ8WXA8 447 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 FOXJ1Q92949 421 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 ECHDC3Q96DC8 303 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 AGAP3Q96P47 875 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 KDM4CQ9H3R0 1056 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 KCND1Q9NSA2 647 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 PCDHGC4Q9Y5F7 938 aa21.89■■□□□ 1.09
SEC22C-207ENST00000423701 FRYLO94915 3013 aa21.88■■□□□ 1.09
SEC22C-207ENST00000423701 METTL12A8MUP2 240 aa21.88■■□□□ 1.09
SEC22C-207ENST00000423701 SOCS5O75159 536 aa21.88■■□□□ 1.09
SEC22C-207ENST00000423701 EPN2O95208 641 aa21.88■■□□□ 1.09
SEC22C-207ENST00000423701 NIPAL4Q0D2K0 466 aa21.88■■□□□ 1.09
SEC22C-207ENST00000423701 IHHQ14623 411 aa21.88■■□□□ 1.09
SEC22C-207ENST00000423701 TEX44Q53QW1 395 aa21.88■■□□□ 1.09
SEC22C-207ENST00000423701 LRRC73Q5JTD7 316 aa21.88■■□□□ 1.09
SEC22C-207ENST00000423701 CFAP58Q5T655 872 aa21.88■■□□□ 1.09
SEC22C-207ENST00000423701 KIAA0895LQ68EN5 471 aa21.88■■□□□ 1.09
SEC22C-207ENST00000423701 BRAT1Q6PJG6 821 aa21.88■■□□□ 1.09
SEC22C-207ENST00000423701 ADAT2Q7Z6V5 191 aaKnown RBP21.88■■□□□ 1.09
SEC22C-207ENST00000423701 C17orf53Q8N3J3 647 aaPredicted RBP21.88■■□□□ 1.09
SEC22C-207ENST00000423701 HCAR2Q8TDS4 363 aa21.88■■□□□ 1.09
SEC22C-207ENST00000423701 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.88■■□□□ 1.09
SEC22C-207ENST00000423701 TBC1D3DA0A087WVF3 549 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 TBC1D3IA0A087WXS9 549 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 TBC1D3EA0A087X179 549 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 TBC1D3KA0A087X1G2 549 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 TBC1D3FA6NER0 549 aaPredicted RBP21.87■■□□□ 1.09
SEC22C-207ENST00000423701 MEI4A8MW99 385 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 TBC1D3LB9A6J9 549 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 SPINT1O43278 529 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 HTRA2O43464 458 aaPredicted RBP21.87■■□□□ 1.09
SEC22C-207ENST00000423701 CEP104O60308 925 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 IGHV4-34P06331 123 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 TBC1D3HP0C7X1 549 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 CES1P23141 567 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 PPP2CBP62714 309 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 PPP2CAP67775 309 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 CREB5Q02930 508 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 TRAF2Q12933 501 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 TBC1D3GQ6DHY5 549 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 TBC1D3CQ6IPX1 549 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 CYP2U1Q7Z449 544 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 TTC7BQ86TV6 843 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 TBC1D3Q8IZP1 549 aaPredicted RBP21.87■■□□□ 1.09
SEC22C-207ENST00000423701 RAB7BQ96AH8 199 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 BIRC7Q96CA5 298 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 PREBQ9HCU5 417 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 GMEB2Q9UKD1 530 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 ITM2BQ9Y287 266 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 FADS3Q9Y5Q0 445 aa21.87■■□□□ 1.09
SEC22C-207ENST00000423701 AP1G1O43747 822 aa21.86■■□□□ 1.09
SEC22C-207ENST00000423701 FSBPO95073 299 aa21.86■■□□□ 1.09
SEC22C-207ENST00000423701 RETP07949 1114 aa21.86■■□□□ 1.09
SEC22C-207ENST00000423701 TIMP2P16035 220 aa21.86■■□□□ 1.09
SEC22C-207ENST00000423701 ITPKAP23677 461 aa21.86■■□□□ 1.09
SEC22C-207ENST00000423701 GNG11P61952 73 aa21.86■■□□□ 1.09
SEC22C-207ENST00000423701 DARS2Q6PI48 645 aaKnown RBP21.86■■□□□ 1.09
SEC22C-207ENST00000423701 SLC35B2Q8TB61 432 aa21.86■■□□□ 1.09
SEC22C-207ENST00000423701 ATG4AQ8WYN0 398 aa21.86■■□□□ 1.09
SEC22C-207ENST00000423701 TEKT5Q96M29 485 aa21.86■■□□□ 1.09
SEC22C-207ENST00000423701 VAT1Q99536 393 aa21.86■■□□□ 1.09
SEC22C-207ENST00000423701 NCDNQ9UBB6 729 aa21.86■■□□□ 1.09
SEC22C-207ENST00000423701 ATXN2Q99700 1313 aaKnown RBP21.86■■□□□ 1.09
SEC22C-207ENST00000423701 BCLAF3A2AJT9 711 aaKnown RBP21.85■■□□□ 1.09
SEC22C-207ENST00000423701 UPK3BL1B0FP48 263 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 UPK3BL2E5RIL1 263 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 AREL1O15033 823 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 FGGP02679 453 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 MMP2P08253 660 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 UGP2Q16851 508 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 SYCP2LQ5T4T6 812 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 ZNF567Q8N184 647 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 PAF1Q8N7H5 531 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 PDCD6IPQ8WUM4 868 aaKnown RBP21.85■■□□□ 1.09
SEC22C-207ENST00000423701 SNX19Q92543 992 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 SPOCK2Q92563 424 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 WDR24Q96S15 920 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 ARRDC1-AS1Q9H2J1 176 aa21.85■■□□□ 1.09
SEC22C-207ENST00000423701 KLHL8Q9P2G9 620 aaPredicted RBP21.85■■□□□ 1.09
SEC22C-207ENST00000423701 GGT7Q9UJ14 662 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms