RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 GPR27Q9NS67 375 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 MYO1AQ9UBC5 1043 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 PCDHGA1Q9Y5H4 931 aa15.39■□□□□ 0.05
USB1-202ENST00000423271 J3KR12 359 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 NEMP1O14524 444 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 AREL1O15033 823 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 FFAR2O15552 330 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 TSPAN6O43657 245 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 SIGLEC6O43699 453 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 PIGNO95427 931 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 DGKAP23743 735 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 MIPP30301 263 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 HTR7P34969 479 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 CAMK2BQ13554 666 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 PROX2Q3B8N5 592 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 TPRG1LQ5T0D9 272 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 ERMARDQ5T6L9 678 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 FNIP1Q8TF40 1166 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 SLC39A8Q9C0K1 460 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 CCDC86Q9H6F5 360 aaKnown RBP15.38■□□□□ 0.05
USB1-202ENST00000423271 ABHD10Q9NUJ1 306 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 UBA2Q9UBT2 640 aaPredicted RBP15.38■□□□□ 0.05
USB1-202ENST00000423271 HS3ST3A1Q9Y663 406 aa15.38■□□□□ 0.05
USB1-202ENST00000423271 BZW2Q9Y6E2 419 aaKnown RBP15.38■□□□□ 0.05
USB1-202ENST00000423271 AKR1B15C9JRZ8 316 aaPredicted RBP15.37■□□□□ 0.05
USB1-202ENST00000423271 PRAMEF11O60813 436 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 LRCH4O75427 683 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 PIAS2O75928 621 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 GIMD1P0DJR0 217 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 TCF4P15884 667 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 CKMT2P17540 419 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 PAPOLAP51003 745 aaKnown RBP15.37■□□□□ 0.05
USB1-202ENST00000423271 NDST2P52849 883 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 SGCGQ13326 291 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 FZD2Q14332 565 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 PPP6R3Q5H9R7 873 aaPredicted RBP15.37■□□□□ 0.05
USB1-202ENST00000423271 RFX8Q6ZV50 586 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 TTC7BQ86TV6 843 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 ARHGAP12Q8IWW6 846 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 NPWQ8N729 165 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.37■□□□□ 0.05
USB1-202ENST00000423271 ISCUQ9H1K1 167 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 DNAJC28Q9NX36 388 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 MFHAS1Q9Y4C4 1052 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 SCINQ9Y6U3 715 aa15.37■□□□□ 0.05
USB1-202ENST00000423271 LRRK1Q38SD2 2015 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 TRABD2BA6NFA1 517 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 FPGTO14772 594 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 PRPSAP2O60256 369 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 MMP20O60882 483 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 RNF8O76064 485 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 TIMP2P16035 220 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 ERCC2P18074 760 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 EIF4A3P38919 411 aaKnown RBP15.36■□□□□ 0.05
USB1-202ENST00000423271 RGRP47804 291 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 RAD51Q06609 339 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 TSR1Q2NL82 804 aaKnown RBP15.36■□□□□ 0.05
USB1-202ENST00000423271 AFMIDQ63HM1 303 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 ARHGAP36Q6ZRI8 547 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 VPS36Q86VN1 386 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 ZSCAN30Q86W11 494 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 TMPRSS12Q86WS5 348 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 CNGA4Q8IV77 575 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 TP53INP2Q8IXH6 220 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 TC2NQ8N9U0 490 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 OR4C6Q8NH72 309 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 ARHGEF26Q96DR7 871 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 LENG8Q96PV6 779 aaPredicted RBP15.36■□□□□ 0.05
USB1-202ENST00000423271 NCAPGQ9BPX3 1015 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 WRAP53Q9BUR4 548 aaKnown RBP15.36■□□□□ 0.05
USB1-202ENST00000423271 DKK3Q9UBP4 350 aa15.36■□□□□ 0.05
USB1-202ENST00000423271 MYLKQ15746 1914 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 A0A087X0T9 212 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 SPTY2D1-AS1A0A0U1RR47 76 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 ARHGAP42A6NI28 874 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 EIF3CLB5ME19 914 aaKnown RBP15.35■□□□□ 0.05
USB1-202ENST00000423271 DAPK3O43293 454 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 NEBLO76041 1014 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 C1SP09871 688 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 FAM228BP0C875 321 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 MYBL1P10243 752 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 MYF5P13349 255 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 IL1R2P27930 398 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 IGFALSP35858 605 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 RABIFP47224 123 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 PFN3P60673 137 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 ZNF211Q13398 564 aaPredicted RBP15.35■□□□□ 0.05
USB1-202ENST00000423271 DPYSQ14117 519 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 PDE1CQ14123 709 aaPredicted RBP15.35■□□□□ 0.05
USB1-202ENST00000423271 SMTNL2Q2TAL5 461 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 HES3Q5TGS1 186 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 PARGQ86W56 976 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 DENND6BQ8NEG7 585 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 FAM174AQ8TBP5 190 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 CXorf40AQ8TE69 158 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 ASB12Q8WXK4 309 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 TRIM11Q96F44 468 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 IFT43Q96FT9 208 aa15.35■□□□□ 0.05
USB1-202ENST00000423271 EIF3CQ99613 913 aaKnown RBP15.35■□□□□ 0.05
USB1-202ENST00000423271 CHP1Q99653 195 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms