RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 SEC16BQ96JE7 1060 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 C20orf96Q9NUD7 363 aaPredicted RBP21.18■□□□□ 0.98
GPC1-202ENST00000420138 NKIRAS1Q9NYS0 192 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 LHX3Q9UBR4 397 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 PDE4DIPQ5VU43 2346 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 INSIG1O15503 277 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 MT-CO1P00395 513 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 SERPINF2P08697 491 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 CA4P22748 312 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 CNTFP26441 200 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 CCNFP41002 786 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 NEK3P51956 506 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 ARMC3Q5W041 872 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 RNF135Q8IUD6 432 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 CACNA2D3Q8IZS8 1091 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 ITFG1Q8TB96 612 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 MRPL38Q96DV4 380 aaKnown RBP21.17■□□□□ 0.98
GPC1-202ENST00000420138 CPNE1Q99829 537 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 INTS6Q9UL03 887 aaKnown RBP21.17■□□□□ 0.98
GPC1-202ENST00000420138 GRID1Q9ULK0 1009 aa21.17■□□□□ 0.98
GPC1-202ENST00000420138 C2orf16Q68DN1 1984 aa21.16■□□□□ 0.98
GPC1-202ENST00000420138 GOLGA8TH3BQL2 631 aa21.16■□□□□ 0.98
GPC1-202ENST00000420138 KIAA0754O94854 1291 aa21.16■□□□□ 0.98
GPC1-202ENST00000420138 F7P08709 466 aaPredicted RBP21.16■□□□□ 0.98
GPC1-202ENST00000420138 CD70P32970 193 aa21.16■□□□□ 0.98
GPC1-202ENST00000420138 GP5P40197 560 aa21.16■□□□□ 0.98
GPC1-202ENST00000420138 SCNN1BP51168 640 aa21.16■□□□□ 0.98
GPC1-202ENST00000420138 USP4Q13107 963 aa21.16■□□□□ 0.98
GPC1-202ENST00000420138 CBX2Q14781 532 aaPredicted RBP21.16■□□□□ 0.98
GPC1-202ENST00000420138 C6orf89Q6UWU4 347 aa21.16■□□□□ 0.98
GPC1-202ENST00000420138 YTHDF3Q7Z739 585 aaKnown RBP21.16■□□□□ 0.98
GPC1-202ENST00000420138 TMEM25Q86YD3 366 aa21.16■□□□□ 0.98
GPC1-202ENST00000420138 TCP10LQ8TDR4 215 aa21.16■□□□□ 0.98
GPC1-202ENST00000420138 ING5Q8WYH8 240 aa21.16■□□□□ 0.98
GPC1-202ENST00000420138 NUDCD1Q96RS6 583 aa21.16■□□□□ 0.98
GPC1-202ENST00000420138 C12orf65Q9H3J6 166 aaKnown RBP21.16■□□□□ 0.98
GPC1-202ENST00000420138 MROH6A6NGR9 719 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 PENKP01210 267 aaPredicted RBP21.15■□□□□ 0.98
GPC1-202ENST00000420138 PRLP01236 227 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 TCF3P15923 654 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 HLA-DPA1P20036 260 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 CNGA3Q16281 694 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 PDPK2PQ6A1A2 396 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 CDHR3Q6ZTQ4 885 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 LRRC34Q8IZ02 419 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 GDAP1Q8TB36 358 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 PPP2R3CQ969Q6 453 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 APOPT1Q96IL0 206 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 LINC00597Q9H2U6 94 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 IARS2Q9NSE4 1012 aaKnown RBP21.15■□□□□ 0.98
GPC1-202ENST00000420138 HAUS2Q9NVX0 235 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 SLC17A7Q9P2U7 560 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 HEATR9A2RTY3 570 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 ANKRD65E5RJM6 399 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 K7ERQ8 282 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 ZNF197O14709 1029 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 ALDOAP04075 364 aaKnown RBP21.15■□□□□ 0.98
GPC1-202ENST00000420138 ITGA2BP08514 1039 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 GRTP1Q5TC63 336 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 ARID3BQ8IVW6 561 aaPredicted RBP21.15■□□□□ 0.98
GPC1-202ENST00000420138 CNTN4Q8IWV2 1026 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 RBBP8Q99708 897 aa21.15■□□□□ 0.98
GPC1-202ENST00000420138 NSRP1Q9H0G5 558 aaKnown RBP21.15■□□□□ 0.98
GPC1-202ENST00000420138 KIAA1522Q9P206 1035 aaPredicted RBP21.15■□□□□ 0.98
GPC1-202ENST00000420138 FCF1Q9Y324 198 aaKnown RBP21.15■□□□□ 0.98
GPC1-202ENST00000420138 LDB2O43679 373 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 ZWINTO95229 277 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 VAPBO95292 243 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 FGF1P05230 155 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 VIMP08670 466 aaKnown RBP21.14■□□□□ 0.97
GPC1-202ENST00000420138 GBP2P32456 591 aaPredicted RBP21.14■□□□□ 0.97
GPC1-202ENST00000420138 ETV4P43268 484 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 PLK1P53350 603 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 NSUN2Q08J23 767 aaKnown RBP eCLIP21.14■□□□□ 0.97
GPC1-202ENST00000420138 DNAJC3Q13217 504 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 SEPT6Q14141 434 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 GALNT3Q14435 633 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 PLEKHG6Q3KR16 790 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 TSTD2Q5T7W7 516 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 KIAA0930Q6ICG6 404 aaPredicted RBP21.14■□□□□ 0.97
GPC1-202ENST00000420138 STRA8Q7Z7C7 330 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 OR13J1Q8NGT2 312 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 SMG7Q92540 1137 aaKnown RBP21.14■□□□□ 0.97
GPC1-202ENST00000420138 IFT43Q96FT9 208 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 CABS1Q96KC9 395 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 LRRC3BQ96PB8 259 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 CDCA3Q99618 268 aaPredicted RBP21.14■□□□□ 0.97
GPC1-202ENST00000420138 TDRD1Q9BXT4 1180 aaKnown RBP21.14■□□□□ 0.97
GPC1-202ENST00000420138 PRO3102Q9H379 93 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 PIDD1Q9HB75 910 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 SCUBE2Q9NQ36 999 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 MKS1Q9NXB0 559 aa21.14■□□□□ 0.97
GPC1-202ENST00000420138 MRPS23Q9Y3D9 190 aaKnown RBP21.14■□□□□ 0.97
GPC1-202ENST00000420138 SIN3BO75182 1162 aa21.13■□□□□ 0.97
GPC1-202ENST00000420138 PAPSS2O95340 614 aaPredicted RBP21.13■□□□□ 0.97
GPC1-202ENST00000420138 NDST3O95803 873 aa21.13■□□□□ 0.97
GPC1-202ENST00000420138 CES1P23141 567 aa21.13■□□□□ 0.97
GPC1-202ENST00000420138 HLA-FP30511 346 aa21.13■□□□□ 0.97
GPC1-202ENST00000420138 FOXN2P32314 431 aa21.13■□□□□ 0.97
GPC1-202ENST00000420138 RGS19P49795 217 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms