RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 BTN2A3PQ96KV6 586 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 QKIQ96PU8 341 aaKnown RBP eCLIP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 FUNDC2Q9BWH2 189 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 TRIM15Q9C019 465 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 CPNE5Q9HCH3 593 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 GPATCH2LQ9NWQ4 482 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 SYBUQ9NX95 663 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 TMA7Q9Y2S6 64 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 C2CD4BA6NLJ0 364 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 M0QX08 132 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 AURKAO14965 403 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 TPST1O60507 370 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 UGT2B11O75310 529 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 KRT76Q01546 638 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 GBE1Q04446 702 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 AGKQ53H12 422 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 SPANXN3Q5MJ09 141 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 SCARA5Q6ZMJ2 495 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 YME1L1Q96TA2 773 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 ZNF670Q9BS34 389 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 POLR3FQ9H1D9 316 aaPredicted RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 EIF2B3Q9NR50 452 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 CCDC167Q9P0B6 97 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 GMPR2Q9P2T1 348 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 FAM198AQ9UFP1 575 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 A6NL46 340 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 TMEM233B4DJY2 109 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 H0YAE9 185 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 KMOO15229 486 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 PARNO95453 639 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 ELK4P28324 431 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 LRPAP1P30533 357 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 SERPINB1P30740 379 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 ASPAP45381 313 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 TGFB2P61812 414 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 SNX17Q15036 470 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 LRIT3Q3SXY7 679 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 LINC00523Q86TU6 105 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 SLC22A16Q86VW1 577 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 HEATR4Q86WZ0 1026 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 RAVER1Q8IY67 606 aaKnown RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 RXFP2Q8WXD0 754 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 HDAC10Q969S8 669 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 MYRFLQ96LU7 910 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 CLSTN3Q9BQT9 956 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 SLC25A23Q9BV35 468 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 PDGFDQ9GZP0 370 aaPredicted RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 SOX17Q9H6I2 414 aaPredicted RBP8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 TASP1Q9H6P5 420 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 FBXO8Q9NRD0 319 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 ENPP5Q9UJA9 477 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 AP4E1Q9UPM8 1137 aa8.09□□□□□ -1.11
HMGXB4-202ENST00000418170 NRP2O60462 931 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 DEAF1O75398 565 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 STBD1O95210 358 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SNAP29O95721 258 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 ENO2P09104 434 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 FCGR1AP12314 374 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 PDGFRAP16234 1089 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 AXLP30530 894 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 NR4A2P43354 598 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 RPS6P62753 249 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CDO1Q16878 200 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 HEATR6Q6AI08 1181 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SMYD5Q6GMV2 418 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CES3Q6UWW8 571 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 LAYNQ6UX15 382 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 PIGZQ86VD9 579 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 ARMC8Q8IUR7 673 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 WDR49Q8IV35 697 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CLIP4Q8N3C7 705 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CHURC1Q8WUH1 139 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SLC39A3Q9BRY0 314 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 MTMR12Q9C0I1 747 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 COA1Q9GZY4 146 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 GMIPQ9P107 970 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 PHIPQ8WWQ0 1821 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CCDC78A2IDD5 438 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 LRRIQ4A6NIV6 560 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 DDHD2O94830 711 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 NTRK1P04629 796 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CCND2P30279 289 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 NKX2-5P52952 324 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 CLCQ05315 142 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SLC12A1Q13621 1099 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 HSDL1Q3SXM5 330 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SEZ6Q53EL9 994 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 PITRM1Q5JRX3 1037 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SLC27A3Q5K4L6 730 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 LCN8Q6JVE9 175 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 NEK10Q6ZWH5 1172 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SLCO6A1Q86UG4 719 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 SPPL2CQ8IUH8 684 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 ADGRG5Q8IZF4 528 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 ZCCHC7Q8N3Z6 543 aaKnown RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 PIK3C3Q8NEB9 887 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 TRPV3Q8NET8 790 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 MAGEE2Q8TD90 523 aaPredicted RBP8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 STYXQ8WUJ0 223 aa8.08□□□□□ -1.12
HMGXB4-202ENST00000418170 HDAC11Q96DB2 347 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms