RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ABCG4Q9H172 646 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 PCDHGA8Q9Y5G5 932 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 MYO9AB2RTY4 2548 aa18.3■□□□□ 0.52
VCP-202ENST00000417448 SPTAN1Q13813 2472 aaKnown RBP18.29■□□□□ 0.52
VCP-202ENST00000417448 PRAMEF26H0Y7S4 382 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 CASC3O15234 703 aaKnown RBP18.29■□□□□ 0.52
VCP-202ENST00000417448 SUV39H1O43463 412 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 NEBLO76041 1014 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 NTRK1P04629 796 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 H2AFZP0C0S5 128 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 NUDT1P36639 197 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 ECT2LQ008S8 904 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 CDH18Q13634 790 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 SETMARQ53H47 684 aaPredicted RBP18.29■□□□□ 0.52
VCP-202ENST00000417448 ATG14Q6ZNE5 492 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 H2AFVQ71UI9 128 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 ZNF683Q8IZ20 524 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 CCAR2Q8N163 923 aaKnown RBP18.29■□□□□ 0.52
VCP-202ENST00000417448 SLC22A18ASQ8N1D0 253 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 OR52K2Q8NGK3 314 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 CCDC97Q96F63 343 aaPredicted RBP18.29■□□□□ 0.52
VCP-202ENST00000417448 PEBP4Q96S96 227 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 KDM4CQ9H3R0 1056 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 NLGN3Q9NZ94 848 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 ANKMY1Q9P2S6 941 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 SCINQ9Y6U3 715 aa18.29■□□□□ 0.52
VCP-202ENST00000417448 USP9YO00507 2555 aaPredicted RBP18.29■□□□□ 0.52
VCP-202ENST00000417448 TMEM110-MUSTN1A8MSY1 372 aa18.28■□□□□ 0.52
VCP-202ENST00000417448 SLC7A4O43246 635 aa18.28■□□□□ 0.52
VCP-202ENST00000417448 LUC7L3O95232 432 aaKnown RBP18.28■□□□□ 0.52
VCP-202ENST00000417448 TAS2R38P59533 333 aa18.28■□□□□ 0.52
VCP-202ENST00000417448 CNTN1Q12860 1018 aa18.28■□□□□ 0.52
VCP-202ENST00000417448 ZNF574Q6ZN55 896 aaPredicted RBP18.28■□□□□ 0.52
VCP-202ENST00000417448 CLEC14AQ86T13 490 aa18.28■□□□□ 0.52
VCP-202ENST00000417448 PANX2Q96RD6 677 aa18.28■□□□□ 0.52
VCP-202ENST00000417448 CCNL2Q96S94 520 aaPredicted RBP18.28■□□□□ 0.52
VCP-202ENST00000417448 MRPL47Q9HD33 250 aaKnown RBP18.28■□□□□ 0.52
VCP-202ENST00000417448 CTTNBP2NLQ9P2B4 639 aa18.28■□□□□ 0.52
VCP-202ENST00000417448 ANAPC7Q9UJX3 599 aa18.28■□□□□ 0.52
VCP-202ENST00000417448 K7ESM1 405 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 PRLRP16471 622 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 MIPP30301 263 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 SRSF6Q13247 344 aaKnown RBP18.27■□□□□ 0.52
VCP-202ENST00000417448 CA9Q16790 459 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 RABGAP1LQ5R372 815 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 FOXR1Q6PIV2 292 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 RAD9BQ6WBX8 426 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 TFAP2DQ7Z6R9 452 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 SLFN11Q7Z7L1 901 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 OR13H1Q8NG92 308 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 FRS2Q8WU20 508 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 CTNNBL1Q8WYA6 563 aaPredicted RBP18.27■□□□□ 0.52
VCP-202ENST00000417448 KLK6Q92876 244 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 EXTL1Q92935 676 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 ARRDC3Q96B67 414 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 HAPLN3Q96S86 360 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 GRPEL1Q9HAV7 217 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 FZD3Q9NPG1 666 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 OR12D3Q9UGF7 316 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 FZD10Q9ULW2 581 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 PAXBP1Q9Y5B6 917 aa18.27■□□□□ 0.52
VCP-202ENST00000417448 TYW5A2RUC4 315 aaKnown RBP18.26■□□□□ 0.51
VCP-202ENST00000417448 SLC31A1O15431 190 aa18.26■□□□□ 0.51
VCP-202ENST00000417448 ALPPL2P10696 532 aa18.26■□□□□ 0.51
VCP-202ENST00000417448 MAGEA1P43355 309 aa18.26■□□□□ 0.51
VCP-202ENST00000417448 ZNF542PQ5EBM4 170 aa18.26■□□□□ 0.51
VCP-202ENST00000417448 RNF219Q5W0B1 726 aaPredicted RBP18.26■□□□□ 0.51
VCP-202ENST00000417448 TXNRD3NBQ6F5E7 133 aa18.26■□□□□ 0.51
VCP-202ENST00000417448 GUSBP11Q6P575 273 aa18.26■□□□□ 0.51
VCP-202ENST00000417448 ZNF564Q8TBZ8 553 aaPredicted RBP18.26■□□□□ 0.51
VCP-202ENST00000417448 C1orf74Q96LT6 269 aa18.26■□□□□ 0.51
VCP-202ENST00000417448 CALN1Q9BXU9 219 aa18.26■□□□□ 0.51
VCP-202ENST00000417448 USP29Q9HBJ7 922 aa18.26■□□□□ 0.51
VCP-202ENST00000417448 ATXN7L1Q9ULK2 861 aaPredicted RBP18.26■□□□□ 0.51
VCP-202ENST00000417448 NBASA2RRP1 2371 aa18.26■□□□□ 0.51
VCP-202ENST00000417448 CHD5Q8TDI0 1954 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 GOLGA6L3A6NEY3 463 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 DRGXA6NNA5 263 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 SCAMP1O15126 338 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 LRCH4O75427 683 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 RNF8O76064 485 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 TMEM253P0C7T8 217 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 FAM87AP0C7U9 286 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 IL1R2P27930 398 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 SSR1P43307 286 aaKnown RBP18.25■□□□□ 0.51
VCP-202ENST00000417448 DUSP3P51452 185 aaPredicted RBP18.25■□□□□ 0.51
VCP-202ENST00000417448 PDX1P52945 283 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 CDKN3Q16667 212 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 CXorf57Q6NSI4 855 aaKnown RBP18.25■□□□□ 0.51
VCP-202ENST00000417448 RWDD4Q6NW29 188 aaKnown RBP18.25■□□□□ 0.51
VCP-202ENST00000417448 CRTC1Q6UUV9 634 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 LRRC31Q6UY01 552 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 CYP4V2Q6ZWL3 525 aaPredicted RBP18.25■□□□□ 0.51
VCP-202ENST00000417448 TMEM139Q8IV31 216 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 SLC35G2Q8TBE7 412 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 SNRNP25Q9BV90 132 aaKnown RBP18.25■□□□□ 0.51
VCP-202ENST00000417448 ZWILCHQ9H900 591 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 NDFIP2Q9NV92 336 aa18.25■□□□□ 0.51
VCP-202ENST00000417448 SCN8AQ9UQD0 1980 aa18.24■□□□□ 0.51
VCP-202ENST00000417448 NOTCH2Q04721 2471 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms