RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 CAB39Q9Y376 341 aaPredicted RBP20.61■□□□□ 0.89
AP1S3-205ENST00000415298 BCL10O95999 233 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 SIP14410 1827 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 CTNNA2P26232 953 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 CENPCQ03188 943 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 CDC20Q12834 499 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 ADGRE1Q14246 886 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 TAF5Q15542 800 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 MDH1BQ5I0G3 518 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 FKBP9P1Q75LS8 142 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 ZBTB33Q86T24 672 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 ZC3H3Q8IXZ2 948 aaKnown RBP20.6■□□□□ 0.89
AP1S3-205ENST00000415298 PJA1Q8NG27 643 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 ZNF560Q96MR9 790 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 SLA2Q9H6Q3 261 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 FANCFQ9NPI8 374 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 OLAHQ9NV23 265 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 HSPBP1Q9NZL4 362 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 PQBP1O60828 265 aaKnown RBP20.6■□□□□ 0.89
AP1S3-205ENST00000415298 NOL3O60936 208 aaKnown RBP20.6■□□□□ 0.89
AP1S3-205ENST00000415298 DARSP14868 501 aaKnown RBP20.6■□□□□ 0.89
AP1S3-205ENST00000415298 HNF1BP35680 557 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 EPHB1P54762 984 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 OTUD4Q01804 1114 aaKnown RBP20.6■□□□□ 0.89
AP1S3-205ENST00000415298 TARDBPQ13148 414 aaKnown RBP eCLIP20.6■□□□□ 0.89
AP1S3-205ENST00000415298 ZBTB41Q5SVQ8 909 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 EEF1DP3Q658K8 133 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 ZBTB46Q86UZ6 589 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 ZNF677Q86XU0 584 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 GATAD2AQ86YP4 633 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 CLYBLQ8N0X4 340 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 C4orf33Q8N1A6 199 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 HEXIM2Q96MH2 286 aaKnown RBP20.6■□□□□ 0.89
AP1S3-205ENST00000415298 MCMBPQ9BTE3 642 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 NANOGQ9H9S0 305 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 TAS2R7Q9NYW3 318 aa20.6■□□□□ 0.89
AP1S3-205ENST00000415298 NCAM2O15394 837 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 ERBB2P04626 1255 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 MCF2P10911 925 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 ARF4P18085 180 aaPredicted RBP20.59■□□□□ 0.89
AP1S3-205ENST00000415298 CDH15P55291 814 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 MRPS6P82932 125 aaKnown RBP20.59■□□□□ 0.89
AP1S3-205ENST00000415298 SLC39A5Q6ZMH5 540 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 PRPF39Q86UA1 669 aaKnown RBP20.59■□□□□ 0.89
AP1S3-205ENST00000415298 FAM126BQ8IXS8 530 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 SIX6OS1Q8N1H7 587 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 ZNF276Q8N554 614 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 RBM14Q96PK6 669 aaKnown RBP20.59■□□□□ 0.89
AP1S3-205ENST00000415298 DEPDC7Q96QD5 511 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 MRPL4Q9BYD3 311 aaKnown RBP20.59■□□□□ 0.89
AP1S3-205ENST00000415298 FOXP3Q9BZS1 431 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 RAD21L1Q9H4I0 556 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 KLHL42Q9P2K6 505 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 PPARGC1AQ9UBK2 798 aaKnown RBP20.59■□□□□ 0.89
AP1S3-205ENST00000415298 ZC3H7BQ9UGR2 993 aaKnown RBP20.59■□□□□ 0.89
AP1S3-205ENST00000415298 NAGPAQ9UK23 515 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 C2orf71A6NGG8 1288 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 SPAG6O75602 509 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 RPL9P32969 192 aaKnown RBP20.59■□□□□ 0.89
AP1S3-205ENST00000415298 PTPN11Q06124 597 aaPredicted RBP20.59■□□□□ 0.89
AP1S3-205ENST00000415298 RUNX1T1Q06455 604 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 DLG2Q15700 870 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 RSBN1Q5VWQ0 802 aaPredicted RBP20.59■□□□□ 0.89
AP1S3-205ENST00000415298 ALKBH5Q6P6C2 394 aaKnown RBP20.59■□□□□ 0.89
AP1S3-205ENST00000415298 DBX2Q6ZNG2 339 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 BTLAQ7Z6A9 289 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 VPS11Q9H270 941 aa20.59■□□□□ 0.89
AP1S3-205ENST00000415298 ITIH2P19823 946 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 TAP1Q03518 808 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 KRT80Q6KB66 452 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 FOXR2Q6PJQ5 311 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 TRAF7Q6Q0C0 670 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 CBWD2Q8IUF1 395 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 ZC3H7AQ8IWR0 971 aaKnown RBP20.58■□□□□ 0.89
AP1S3-205ENST00000415298 CADM2Q8N3J6 435 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 LEMD2Q8NC56 503 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 SLC2A14Q8TDB8 520 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 SH3YL1Q96HL8 342 aaPredicted RBP20.58■□□□□ 0.89
AP1S3-205ENST00000415298 TRIM56Q9BRZ2 755 aaKnown RBP20.58■□□□□ 0.89
AP1S3-205ENST00000415298 TMEM106CQ9BVX2 250 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 CHST12Q9NRB3 414 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 EMC3Q9P0I2 261 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 GMEB2Q9UKD1 530 aa20.58■□□□□ 0.89
AP1S3-205ENST00000415298 CNOT11Q9UKZ1 510 aaKnown RBP20.58■□□□□ 0.89
AP1S3-205ENST00000415298 C12orf71A8MTZ7 269 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 POC1B-GALNT4F8VUJ3 575 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 TP73O15350 636 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 PIGRP01833 764 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 ITGB3P05106 788 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 KRT15P19012 456 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 CCNA2P20248 432 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 RRM1P23921 792 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 GRIK1P39086 918 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 ACOT2P49753 483 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 CRYBB1P53674 252 aaPredicted RBP20.58■□□□□ 0.88
AP1S3-205ENST00000415298 ZNF211Q13398 564 aaPredicted RBP20.58■□□□□ 0.88
AP1S3-205ENST00000415298 ATF7IP2Q5U623 682 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 METTL11BQ5VVY1 283 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 CARM1Q86X55 608 aa20.58■□□□□ 0.88
AP1S3-205ENST00000415298 CHAC2Q8WUX2 184 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms