RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SLC15A1P46059 708 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 GPR3P46089 330 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 VASPP50552 380 aaPredicted RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 TSPAN5P62079 268 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 CLDN10P78369 228 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 SMAD2Q15796 467 aaKnown RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 CHRNA2Q15822 529 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 CCDC142Q17RM4 750 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ZBED5Q49AG3 693 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 SLFN12LQ6IEE8 588 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 RTL4Q6ZR62 310 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 JAMLQ86YT9 394 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ZC3H3Q8IXZ2 948 aaKnown RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 C7orf61Q8IZ16 206 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 SNX31Q8N9S9 440 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 MFSD2AQ8NA29 543 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 RBM15BQ8NDT2 890 aaKnown RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 ZNF420Q8TAQ5 688 aaPredicted RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 EDARADDQ8WWZ3 215 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ASB12Q8WXK4 309 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ATOH1Q92858 354 aaPredicted RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 MYDGFQ969H8 173 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 MCUR1Q96AQ8 359 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ACPTQ9BZG2 426 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 AP5M1Q9H0R1 490 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 Q9H521 79 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ASB7Q9H672 318 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 RPRD1BQ9NQG5 326 aaKnown RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 MTO1Q9Y2Z2 717 aaKnown RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 DTNAQ9Y4J8 743 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 HRH3Q9Y5N1 445 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 TP53BP1Q12888 1972 aaPredicted RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 NFASCO94856 1347 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 LAMB2P55268 1798 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 FAM205CA6NFA0 338 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 FAM47DPA6NHR8 397 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 FPGTO14772 594 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 GNB5O14775 395 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 NBNO60934 754 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 RPS6KA4O75676 772 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 KCNK2O95069 426 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 HTR3BO95264 441 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 DHFRP00374 187 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 MYCLP12524 364 aaPredicted RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 ANXA8P13928 327 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 CREB1P16220 341 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 SLC9A1P19634 815 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 HSD3B2P26439 372 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ACTR1BP42025 376 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 WDR4P57081 412 aaKnown RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 NKX3-2P78367 333 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 CAV1Q03135 178 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 CHAF1BQ13112 559 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 PUM3Q15397 648 aaKnown RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 FSCBQ5H9T9 825 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 TCHHL1Q5QJ38 904 aaPredicted RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 MARCH8Q5T0T0 291 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ANXA8L1Q5VT79 327 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 RSBN1Q5VWQ0 802 aaPredicted RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 BRAT1Q6PJG6 821 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 OGFOD3Q6PK18 319 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 LIPIQ6XZB0 460 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 CFAP77Q6ZQR2 320 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 KCNK18Q7Z418 384 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ZNF438Q7Z4V0 828 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 DPP10Q8N608 796 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ANKRD42Q8N9B4 389 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 OR4M1Q8NGD0 313 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 MTFMTQ96DP5 389 aaKnown RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 PPP1R16BQ96T49 567 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 MKNK1Q9BUB5 465 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 PINK1Q9BXM7 581 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 PPA2Q9H2U2 334 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ZCCHC4Q9H5U6 513 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 SIRPGQ9P1W8 387 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 SEPT3Q9UH03 358 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 SCML1Q9UN30 329 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 GTF2A1LQ9UNN4 478 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ZFR2Q9UPR6 939 aaKnown RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 PCDHGA9Q9Y5G4 932 aaKnown RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 TANC1Q9C0D5 1861 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 AKAP11Q9UKA4 1901 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 TRBV23-1A0A0A0MS06 115 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 A0A1W2PRG6 482 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 I3L4J1 428 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 EPHB6O15197 1021 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 CA12O43570 354 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 HS6ST1O60243 411 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 FAM155BO75949 473 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 MFN2O95140 757 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 AMHP03971 560 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 SERPINB2P05120 415 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 CACNB2Q08289 660 aaPredicted RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 TEFQ10587 303 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 PMS2P3Q13401 168 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 SERINC3Q13530 473 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 ZNF772Q68DY9 489 aaPredicted RBP5.28□□□□□ -1.56
HERC4-205ENST00000412272 CYB5R2Q6BCY4 276 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 PYHIN1Q6K0P9 492 aa5.28□□□□□ -1.56
HERC4-205ENST00000412272 SYDE1Q6ZW31 735 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms