RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 PAFAH2Q99487 392 aa11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 TINF2Q9BSI4 451 aa11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 A0A1W2PQJ5 194 aa11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 BTN3A3O00478 584 aa11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 CD44P16070 742 aaKnown RBP11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 PTPN5P54829 565 aa11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 MANFP55145 182 aaKnown RBP11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 CCZ1BP86790 482 aa11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 CCZ1P86791 482 aaPredicted RBP11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 SPANXN2Q5MJ10 180 aa11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 KBTBD7Q8WVZ9 684 aa11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 RORBQ92753 470 aa11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 UBE2E3Q969T4 207 aa11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 MAGEB18Q96M61 343 aa11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 SEMA6AQ9H2E6 1030 aa11.32□□□□□ -0.6
PRPF40A-202ENST00000410080 BUD23O43709 281 aaKnown RBP11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 BCL10O95999 233 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 TPP2P29144 1249 aaPredicted RBP11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 MRPS6P82932 125 aaKnown RBP11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 MC1RQ01726 317 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 TARBP2Q15633 366 aaKnown RBP11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 RFX4Q33E94 735 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 SDHAF4Q5VUM1 108 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 SATL1Q86VE3 508 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 WDR60Q8WVS4 1066 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 MTMR8Q96EF0 704 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 SSU72P8A0A1W2PR75 194 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 USP12O75317 370 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 CARTPTQ16568 116 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 GCNT7Q6ZNI0 430 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 OAFQ86UD1 273 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 USP38Q8NB14 1042 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 ZSCAN1Q8NBB4 408 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 PHF10Q8WUB8 498 aaKnown RBP11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 COLEC10Q9Y6Z7 277 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 MAGEC1O60732 1142 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 ACSM2AQ08AH3 577 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 TERF2Q15554 542 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 Q4G0T1 1027 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 NOMO2Q5JPE7 1267 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 N4BP2L1Q5TBK1 243 aaPredicted RBP11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 ACSM2BQ68CK6 577 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 RBM43Q6ZSC3 357 aaKnown RBP11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 CCNJLQ8IV13 435 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 SGCDQ92629 289 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 SENP8Q96LD8 212 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 SPATA5L1Q9BVQ7 753 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 HIPK3Q9H422 1215 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 PTGFRNQ9P2B2 879 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 GAKO14976 1311 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 UMODL1Q5DID0 1318 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 URB1O60287 2271 aaKnown RBP11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 DIP2CQ9Y2E4 1556 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 PLOD3O60568 738 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 NT5EP21589 574 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 NOS2P35228 1153 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 SREBF1P36956 1147 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 ITGA1P56199 1179 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 KCNMA1Q12791 1236 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 DGCR6Q14129 220 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 TEX47Q8TBZ9 253 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 ALG9Q9H6U8 611 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 PTPRMP28827 1452 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 A0A075B6Q4 140 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 SLCO1B7G3V0H7 640 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 ERCC2P18074 760 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 GPR158Q5T848 1215 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 WSCD1Q658N2 575 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 MTDHQ86UE4 582 aaKnown RBP11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 TC2NQ8N9U0 490 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 FBXO15Q8NCQ5 510 aaPredicted RBP11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 ACTRT2Q8TDY3 377 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 LENG9Q96B70 501 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 TEKT5Q96M29 485 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 ZIM3Q96PE6 472 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 TCF7L2Q9NQB0 619 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 GMEB2Q9UKD1 530 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 ASNA1O43681 348 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 LRPAP1P30533 357 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 RFX5P48382 616 aaPredicted RBP11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 RAB25P57735 213 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 MZT2AQ6P582 158 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 ZNF557Q8N988 423 aaPredicted RBP11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 NAT9Q9BTE0 207 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 ANKRD6Q9Y2G4 727 aa11.31□□□□□ -0.6
PRPF40A-202ENST00000410080 PNMA8CA0A1B0GUJ8 204 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 QSOX1O00391 747 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 RSL1D1O76021 490 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 CCNDBP1O95273 360 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 VIPP01282 170 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 CCND1P24385 295 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 MYL9P24844 172 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 DNASE1L1P49184 302 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 PPP2R2BQ00005 443 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 FAM187BQ17R55 369 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 ATP8B4Q8TF62 1192 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 TATDN2Q93075 761 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 CYP3A43Q9HB55 503 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 MBD2Q9UBB5 411 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 KMOO15229 486 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms