RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 BCL7CQ8WUZ0 217 aaPredicted RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 USP13Q92995 863 aaPredicted RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 RIPOR3Q96MK2 946 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 PKD2L2Q9NZM6 624 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 CLCA2Q9UQC9 943 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 GPSM3Q9Y4H4 160 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 PLK4O00444 970 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 APODP05090 189 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 CCDC166P0CW27 439 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 CTSAP10619 480 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 PABPC1P11940 636 aaKnown RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 CREB1P16220 341 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 PGAM1P18669 254 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 NMBRP28336 390 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 LSP1P33241 339 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 GP5P40197 560 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 CDH13P55290 713 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 ZBTB17Q13105 803 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 ARSIQ5FYB1 569 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 SH2D4BQ5SQS7 431 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 MBLAC2Q68D91 279 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 ANO7Q6IWH7 933 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 PQLC3Q8N755 202 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 ZNF513Q8N8E2 541 aaPredicted RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 AENQ8WTP8 325 aaKnown RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 KCTD13Q8WZ19 329 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 CCT8L2Q96SF2 557 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 VAT1Q99536 393 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 MID2Q9UJV3 735 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 FBXO5Q9UKT4 447 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 HBS1LQ9Y450 684 aaKnown RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 ARL5AQ9Y689 179 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 QSER1Q2KHR3 1735 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 AP3B1O00203 1094 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 TPP1O14773 563 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 ENO1P06733 434 aaKnown RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 SOX9P48436 509 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 SERPINB9P50453 376 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 POLR2LP62875 67 aaKnown RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 MGAT3Q09327 533 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 SLC10A2Q12908 348 aaPredicted RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 DSC3Q14574 896 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 HIBCHQ6NVY1 386 aaPredicted RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 CXorf40AQ8TE69 158 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 TSPAN17Q96FV3 270 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 MECRQ9BV79 373 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 FRMD8P1Q9BZ68 369 aaPredicted RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 MARCH5Q9NX47 278 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 TBX21Q9UL17 535 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 PSMD13Q9UNM6 376 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 RAD54BQ9Y620 910 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 FAM95CA0A1B0GW59 222 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 WASH3PC4AMC7 463 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 DNTTP04053 509 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 CDH4P55283 916 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 POU5F1Q01860 360 aaKnown RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 ACOX2Q99424 681 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 EBNA1BP2Q99848 306 aaKnown RBP11.5□□□□□ -0.57
SNX13-202ENST00000409604 NAT9Q9BTE0 207 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 OSBPL6Q9BZF3 934 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 NOD2Q9HC29 1040 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 CATSPERZQ9NTU4 200 aa11.5□□□□□ -0.57
SNX13-202ENST00000409604 LINC01553A4QN01 128 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 STC2O76061 302 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 ASGR2P07307 311 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 ARL4DP49703 201 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 IRAK1P51617 712 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 TERF2Q15554 542 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 PCID2Q5JVF3 399 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 C4orf22Q6V702 233 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 DSG4Q86SJ6 1040 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 ITFG1Q8TB96 612 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 KCTD4Q8WVF5 259 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 TMEM159Q96B96 161 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 PPWD1Q96BP3 646 aaKnown RBP11.49□□□□□ -0.57
SNX13-202ENST00000409604 IL22Q9GZX6 179 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 SMOC2Q9H3U7 446 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 NCKAP1Q9Y2A7 1128 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 PAPPA2Q9BXP8 1791 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 GABRDO14764 452 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 SPAG6O75602 509 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 FSBPO95073 299 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 LUC7L3O95232 432 aaKnown RBP11.49□□□□□ -0.57
SNX13-202ENST00000409604 PIK3R6Q5UE93 754 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 RASGEF1CQ8N431 466 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 MYO19Q96H55 970 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 MAGEB10Q96LZ2 347 aaPredicted RBP11.49□□□□□ -0.57
SNX13-202ENST00000409604 SMIM14Q96QK8 99 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 HBEGFQ99075 208 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 PBX4Q9BYU1 374 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 BRD8Q9H0E9 1235 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 MANSC1Q9H8J5 431 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 ZFYVE1Q9HBF4 777 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 HPS4Q9NQG7 708 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 PRKAB1Q9Y478 270 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 TUBGCP6Q96RT7 1819 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 F8W8V4 182 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 M0QZQ0 153 aa11.49□□□□□ -0.57
SNX13-202ENST00000409604 STAU1O95793 577 aaKnown RBP11.49□□□□□ -0.57
SNX13-202ENST00000409604 ATF6P18850 670 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms