RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 TRIM49BA6NDI0 452 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 POM121BA6NF01 834 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 CDRT15L2A8MXV6 281 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 LMO7DNF2Z398 122 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 SNAP91O60641 907 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 PPFIA2O75334 1257 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 GRAP2O75791 330 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 TM7SF2O76062 418 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 ENDOD1O94919 500 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 RASGRP1O95267 797 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 MT-CO1P00395 513 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 CTSLP07711 333 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 GIMD1P0DJR0 217 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 LIPCP11150 499 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 MYF5P13349 255 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 SULT1E1P49888 294 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 SERPINH1P50454 418 aaKnown RBP7.87□□□□□ -1.15
LSM5-202ENST00000409292 CCNHP51946 323 aaPredicted RBP7.87□□□□□ -1.15
LSM5-202ENST00000409292 SLC6A3Q01959 620 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 CLN3Q13286 438 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 BIRC2Q13490 618 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 C5orf22Q49AR2 442 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 CFAP58Q5T655 872 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 FOXR2Q6PJQ5 311 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 LVRNQ6Q4G3 990 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 CRTC1Q6UUV9 634 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 LINGO4Q6UY18 593 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 ZNF574Q6ZN55 896 aaPredicted RBP7.87□□□□□ -1.15
LSM5-202ENST00000409292 DPY19L3Q6ZPD9 716 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 SLC26A9Q7LBE3 791 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 TFAP2DQ7Z6R9 452 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 GKN2Q86XP6 184 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 ZNF354CQ86Y25 554 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 CREBRFQ8IUR6 639 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 ARHGEF19Q8IW93 802 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 SLC22A18ASQ8N1D0 253 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 PAF1Q8N7H5 531 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 ARL10Q8N8L6 244 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 CHST14Q8NCH0 376 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 BMFQ96LC9 184 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 C1orf74Q96LT6 269 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 CCDC3Q9BQI4 270 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 ZSWIM1Q9BR11 485 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 ZYG11BQ9C0D3 744 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 RETREG1Q9H6L5 497 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 ZDHHC6Q9H6R6 413 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 ZFR2Q9UPR6 939 aaKnown RBP7.87□□□□□ -1.15
LSM5-202ENST00000409292 CNTN6Q9UQ52 1028 aa7.87□□□□□ -1.15
LSM5-202ENST00000409292 ASH1LQ9NR48 2969 aaKnown RBP7.87□□□□□ -1.15
LSM5-202ENST00000409292 LAMA5O15230 3695 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 NYNRINQ9P2P1 1898 aaKnown RBP7.86□□□□□ -1.15
LSM5-202ENST00000409292 ZSCAN5CA6NGD5 496 aaPredicted RBP7.86□□□□□ -1.15
LSM5-202ENST00000409292 IGLON5A6NGN9 336 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 C16orf96A6NNT2 1141 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 K7ERQ8 282 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 KRIT1O00522 736 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 SMAD6O43541 496 aaKnown RBP7.86□□□□□ -1.15
LSM5-202ENST00000409292 SRGAP2O75044 1071 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 POP4O95707 220 aaKnown RBP7.86□□□□□ -1.15
LSM5-202ENST00000409292 CALCAP01258 141 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 PRKCSHP14314 528 aaPredicted RBP7.86□□□□□ -1.15
LSM5-202ENST00000409292 CD82P27701 267 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 SLC5A2P31639 672 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 NOP2P46087 812 aaKnown RBP7.86□□□□□ -1.15
LSM5-202ENST00000409292 CXCR3P49682 368 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 PEX5P50542 639 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 ATP1A2P50993 1020 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 SUOXP51687 545 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 PMS1P54277 932 aaKnown RBP7.86□□□□□ -1.15
LSM5-202ENST00000409292 RNASE9P60153 205 aaKnown RBP7.86□□□□□ -1.15
LSM5-202ENST00000409292 GNA12Q03113 381 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 ELP6Q0PNE2 266 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 C1orf61Q13536 156 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 EIF4EBP2Q13542 120 aaPredicted RBP7.86□□□□□ -1.15
LSM5-202ENST00000409292 PKP1Q13835 747 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 TAF5Q15542 800 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 ARHGAP44Q17R89 818 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 ZNF805Q5CZA5 627 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 MACC1Q6ZN28 852 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 GBP6Q6ZN66 633 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 FAM183BPQ6ZVS7 135 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 TTC7BQ86TV6 843 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 VPS36Q86VN1 386 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 PASD1Q8IV76 773 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 TRIM59Q8IWR1 403 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 TMEM35BQ8NCS4 154 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 CCDC112Q8NEF3 446 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 ZNF397Q8NF99 534 aaPredicted RBP7.86□□□□□ -1.15
LSM5-202ENST00000409292 LMO3Q8TAP4 145 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 NELFBQ8WX92 580 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 ISG20Q96AZ6 181 aaKnown RBP7.86□□□□□ -1.15
LSM5-202ENST00000409292 PRR11Q96HE9 360 aaPredicted RBP7.86□□□□□ -1.15
LSM5-202ENST00000409292 KREMEN1Q96MU8 473 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 TIGD1Q96MW7 591 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 HAPLN3Q96S86 360 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 CPXM1Q96SM3 734 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 CMKLR1Q99788 373 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.86□□□□□ -1.15
LSM5-202ENST00000409292 BOCQ9BWV1 1114 aa7.86□□□□□ -1.15
LSM5-202ENST00000409292 SEMA4CQ9C0C4 833 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms