RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 BFSP2Q13515 415 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 RABL3Q5HYI8 236 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 KLC3Q6P597 504 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 POTEAQ6S8J7 498 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 ANGPTL8Q6UXH0 198 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 B3GNT6Q6ZMB0 384 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 C11orf74Q86VG3 221 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 ARHGAP18Q8N392 663 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 PTGR2Q8N8N7 351 aaPredicted RBP8.4□□□□□ -1.06
SNX13-201ENST00000409076 FNIP1Q8TF40 1166 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 PPM1MQ96MI6 270 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 CAMKK2Q96RR4 588 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 MLPHQ9BV36 600 aaPredicted RBP8.4□□□□□ -1.06
SNX13-201ENST00000409076 VPS33BQ9H267 617 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 POLR1BQ9H9Y6 1135 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 CYP3A43Q9HB55 503 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.4□□□□□ -1.06
SNX13-201ENST00000409076 EBF1Q9UH73 591 aa8.4□□□□□ -1.06
SNX13-201ENST00000409076 ATP6V1G1O75348 118 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 RPL5P46777 297 aaKnown RBP8.4□□□□□ -1.07
SNX13-201ENST00000409076 GPR15P49685 360 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 LIMK2P53671 638 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 IST1P53990 364 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 CLDN10P78369 228 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 MYBPC1Q00872 1141 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 GNA12Q03113 381 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 NFYCQ13952 458 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 ARCQ7LC44 396 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 CUZD1Q86UP6 607 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 APOBEC3FQ8IUX4 373 aaKnown RBP8.4□□□□□ -1.07
SNX13-201ENST00000409076 IFT43Q96FT9 208 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 PCED1BQ96HM7 432 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 NAA50Q9GZZ1 169 aaKnown RBP8.4□□□□□ -1.07
SNX13-201ENST00000409076 MMADHCQ9H3L0 296 aaPredicted RBP8.4□□□□□ -1.07
SNX13-201ENST00000409076 TLE6Q9H808 572 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 FBXO5Q9UKT4 447 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 SLC27A5Q9Y2P5 690 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 PCDHB12Q9Y5F1 795 aa8.4□□□□□ -1.07
SNX13-201ENST00000409076 KANSL1LA0AUZ9 987 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 UPK3BL1B0FP48 263 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 UPK3BL2E5RIL1 263 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 SNNO75324 88 aaPredicted RBP8.39□□□□□ -1.07
SNX13-201ENST00000409076 GCATO75600 419 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 PGK1P00558 417 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 NPR3P17342 541 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 CRABP2P29373 138 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 EEF1DP29692 281 aaKnown RBP8.39□□□□□ -1.07
SNX13-201ENST00000409076 CD151P48509 253 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 DGKEP52429 567 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 BNIP3Q12983 259 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 LIPMQ5VYY2 423 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 GRAMD4Q6IC98 578 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 NEPROQ6NW34 567 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 SLC27A1Q6PCB7 646 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 TAC4Q86UU9 113 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 DHFR2Q86XF0 187 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 AFAP1L2Q8N4X5 818 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 ARRDC4Q8NCT1 418 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 SH3RF2Q8TEC5 729 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 FIG4Q92562 907 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 ITCHQ96J02 903 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 NR1H4Q96RI1 486 aaPredicted RBP8.39□□□□□ -1.07
SNX13-201ENST00000409076 TBL1YQ9BQ87 522 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 ASB7Q9H672 318 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 PNMA8BQ9ULN7 279 aaPredicted RBP8.39□□□□□ -1.07
SNX13-201ENST00000409076 FZD10Q9ULW2 581 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 ASB3Q9Y575 518 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 MYO1GB0I1T2 1018 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 NT5C1B-RDH14C9J2C7 533 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 F8W8V4 182 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 GSTA4O15217 222 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 CLOCKO15516 846 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 TIMM44O43615 452 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 KPNA6O60684 536 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 TNFAIP8O95379 198 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 AOC1P19801 751 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 C1QTNF8P60827 252 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 FPGSQ05932 587 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 CDH17Q12864 832 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 PRKAA1Q13131 559 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 ADGRE1Q14246 886 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 TMEM26Q6ZUK4 368 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 GPR141Q7Z602 305 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 STK32CQ86UX6 486 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.39□□□□□ -1.07
SNX13-201ENST00000409076 ST13P5Q8NFI4 369 aaPredicted RBP8.39□□□□□ -1.07
SNX13-201ENST00000409076 ACTRT2Q8TDY3 377 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 TBATAQ96M53 351 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 SMAD5Q99717 465 aaKnown RBP8.39□□□□□ -1.07
SNX13-201ENST00000409076 SEPT5Q99719 369 aaPredicted RBP8.39□□□□□ -1.07
SNX13-201ENST00000409076 MIR1-1HGQ9H1L0 117 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 ZFP14Q9HCL3 533 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 CROTQ9UKG9 612 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 UBQLN1Q9UMX0 589 aaKnown RBP8.39□□□□□ -1.07
SNX13-201ENST00000409076 A0A1W2PPW3 197 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 ABLIM1O14639 778 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 BIRC5O15392 142 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 NOBOXO60393 691 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 RHOBTB1O94844 696 aa8.39□□□□□ -1.07
SNX13-201ENST00000409076 HGFP14210 728 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms