RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CDRT15Q96T59 188 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 PKP2Q99959 881 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 FAM192AQ9GZU8 254 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 CPA4Q9UI42 421 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 HS3ST4Q9Y661 456 aa9.95□□□□□ -0.82
MSH2-202ENST00000406134 A0A1B0GVG6 124 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 DFFAO00273 331 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 NPHS1O60500 1241 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 BCAS2O75934 225 aaPredicted RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 DDHD2O94830 711 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 F9P00740 461 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 APOA4P06727 396 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 THP07101 528 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 PABPC4LP0CB38 370 aaKnown RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 RAB27AP51159 221 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 MRPS22P82650 360 aaKnown RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 PRKAA1Q13131 559 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 PDK3Q15120 406 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 TRIP10Q15642 601 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 PDCD2Q16342 344 aaPredicted RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 USP41Q3LFD5 358 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 C6orf10Q5SRN2 563 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 C6orf163Q5TEZ5 329 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 SPRYD7Q5W111 196 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 GK5Q6ZS86 529 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 RNF148Q8N7C7 305 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 USP13Q92995 863 aaPredicted RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 GCNAQ96QF7 691 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 PPP1R12CQ9BZL4 782 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 TRPV6Q9H1D0 765 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 ATXN3LQ9H3M9 355 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 SMOC2Q9H3U7 446 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 CLIC5Q9NZA1 410 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 GMPR2Q9P2T1 348 aaKnown RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 MYOCOSA0A1B0GUC4 107 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 TTC36A6NLP5 189 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 SAT1P21673 171 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 SERPINB6P35237 376 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 ROR2Q01974 943 aaKnown RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 SATL1Q86VE3 508 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 PGBD5Q8N414 524 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 KYQ8NBH2 561 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 IPMKQ8NFU5 416 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 PDCD6IPQ8WUM4 868 aaKnown RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 BTBD9Q96Q07 612 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 GSTO2Q9H4Y5 243 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 MEAF6Q9HAF1 191 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 G3BP2Q9UN86 482 aaKnown RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 MKI67P46013 3256 aaKnown RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 TTC24A2A3L6 582 aaPredicted RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 RNASEH2AO75792 299 aaKnown RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 TFAP2AP05549 437 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 THRAP10827 490 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 HNRNPLP14866 589 aaKnown RBP eCLIP9.94□□□□□ -0.82
MSH2-202ENST00000406134 ZNF135P52742 658 aaPredicted RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 CYLC2Q14093 348 aaPredicted RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 ARL13BQ3SXY8 428 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 KIAA0930Q6ICG6 404 aaPredicted RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 SLC30A9Q6PML9 568 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 PAOXQ6QHF9 649 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 PDZD4Q76G19 769 aaPredicted RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 SNX31Q8N9S9 440 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 HASPINQ8TF76 798 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 NSMCE3Q96MG7 304 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 NDNQ99608 321 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 ACBD6Q9BR61 282 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 ARNT2Q9HBZ2 717 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 MPP6Q9NZW5 540 aa9.94□□□□□ -0.82
MSH2-202ENST00000406134 C6orf203Q9P0P8 240 aaPredicted RBP9.94□□□□□ -0.82
MSH2-202ENST00000406134 ZFC3H1O60293 1989 aaKnown RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 C15orf38-AP3S2A0A0A6YYH1 394 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 MROH6A6NGR9 719 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 A8MT66 165 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 VILLO15195 856 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 ZNF189O75820 626 aaPredicted RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 CRTAMO95727 393 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 CDKN2DP55273 166 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 DSC3Q14574 896 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 UGT3A2Q3SY77 523 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 ISLR2Q6UXK2 745 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 ARPINQ7Z6K5 226 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 LINC00523Q86TU6 105 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 MYEOVQ96EZ4 313 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 PRICKLE1Q96MT3 831 aaPredicted RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 POMKQ9H5K3 350 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 PRDM5Q9NQX1 630 aaPredicted RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 CD300AQ9UGN4 299 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 ZNF26P17031 533 aaPredicted RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 CPT1AP50416 773 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 ARSDP51689 593 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 SLC5A3P53794 718 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 PRKAA2P54646 552 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 SH2D4BQ5SQS7 431 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 ZNF470Q6ECI4 717 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 BNC2Q6ZN30 1099 aaPredicted RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 TRIM67Q6ZTA4 783 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 BHLHE22Q8NFJ8 381 aaPredicted RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 FCRL2Q96LA5 508 aaPredicted RBP9.93□□□□□ -0.82
MSH2-202ENST00000406134 OCEL1Q9H607 264 aa9.93□□□□□ -0.82
MSH2-202ENST00000406134 ZNF408Q9H9D4 720 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms