RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SPRTNQ9H040 489 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 FBRSL1Q9HCM7 1045 aaKnown RBP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 NRIP3Q9NQ35 241 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 ATP8A2Q9NTI2 1148 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 NLKQ9UBE8 527 aa5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 HEMK1Q9Y5R4 338 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P13-201ENST00000406019 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 TMEM247A6NEH6 219 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 CDRT15L2A8MXV6 281 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 ADAM20O43506 726 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 STRNO43815 780 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 ENTPD3O75355 529 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 VDRP11473 427 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 FCGR2AP12318 317 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 GCH1P30793 250 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 SOX2P48431 317 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 CDH8P55286 799 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 CEBPZQ03701 1054 aaKnown RBP5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 PLK5Q496M5 336 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 SERTAD4-AS1Q5TG53 156 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 GARNL3Q5VVW2 1013 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 MIS18BP1Q6P0N0 1132 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 VSTM1Q6UX27 236 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 IL20RBQ6UXL0 311 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 DEF8Q6ZN54 512 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 TFAP2DQ7Z6R9 452 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 ADGRA1Q86SQ6 560 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 GLCCI1Q86VQ1 547 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 C16orf71Q8IYS4 520 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 Q8N9P0 234 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 OSR1Q8TAX0 266 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 PSPC1Q8WXF1 523 aaKnown RBP5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 JAKMIP2Q96AA8 810 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 PGAM5Q96HS1 289 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 ADAD1Q96M93 576 aaKnown RBP5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 HS6ST2Q96MM7 605 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 FRG2BQ96QU4 278 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 FAM118BQ9BPY3 351 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 RSPH9Q9H1X1 276 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 OR10A4Q9H209 315 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 ABI3Q9P2A4 366 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 FBXO40Q9UH90 709 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 ZNF112Q9UJU3 913 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 A4GNTQ9UNA3 340 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 ICKQ9UPZ9 632 aa5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.17□□□□□ -1.58
HMGB1P13-201ENST00000406019 ARHGAP10A1A4S6 786 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 CBY3A6NI87 242 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 IFNL4K9M1U5 179 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 USP12O75317 370 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 APOA4P06727 396 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 GABRB1P18505 474 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 TBXAS1P24557 533 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 MCM3P25205 808 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 HOXD9P28356 352 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 HSD17B4P51659 736 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 YPEL5P62699 121 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 KRT83P78385 493 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 GOLGA8DPQ0D2H9 430 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 LRMPQ12912 555 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 RNPS1Q15287 305 aaKnown RBP5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 LCE1AQ5T7P2 110 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 MOB3CQ70IA8 216 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 KLBQ86Z14 1044 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 RHPN2Q8IUC4 686 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 GHDCQ8N2G8 530 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 KCTD6Q8NC69 237 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 PIGOQ8TEQ8 1089 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 ZFPM2Q8WW38 1151 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 TM2D2Q9BX73 214 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 SH2D4AQ9H788 454 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 ENTPD7Q9NQZ7 604 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 BABAM1Q9NWV8 329 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 GRHL1Q9NZI5 618 aa5.16□□□□□ -1.58
HMGB1P13-201ENST00000406019 TCRBV7S3A2A0A539 114 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 FAM90A8PA6NJQ4 464 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 LRRC53A6NM62 1247 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 BTBD18B2RXH4 712 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 ADAM10O14672 748 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 HNRNPCL1O60812 293 aaKnown RBP5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 DDAH2O95865 285 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 FAM90A13PP0C7W8 464 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 FAM90A24PP0C7X0 464 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 SELLP14151 372 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 GABRB2P47870 512 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 PCLAFQ15004 111 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 TAF11Q15544 211 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 ANXA2RQ3ZCQ2 193 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 ARL13AQ5H913 290 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 GKAP1Q5VSY0 366 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 TBC1D9BQ66K14 1250 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 JADE1Q6IE81 842 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 UBE2Q1Q7Z7E8 422 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 DNAAF1Q8NEP3 725 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 TMEM170AQ8WVE7 144 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 IP6K1Q92551 441 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 SLC22A18Q96BI1 424 aa5.15□□□□□ -1.59
HMGB1P13-201ENST00000406019 MMABQ96EY8 250 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms